Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120499.Seq
         (816 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CB17A Cluster: hypothetical protein TTHERM_0029...    33   6.5  

>UniRef50_UPI00006CB17A Cluster: hypothetical protein
           TTHERM_00299740; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00299740 - Tetrahymena
           thermophila SB210
          Length = 765

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 22/87 (25%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
 Frame = +3

Query: 138 SYKSIVASENLE*NDYSLIIIRQLDTGALELCIELPLRYPMSCRPTTCMSSFEY--KIIL 311
           S+K I    ++  N+  L  +R L   A +  I+  +   ++  P + +  F    + IL
Sbjct: 215 SFKLIFPKRSVIQNNSLLPFLRSL--AAKQTFIDEKIISNLNIDPKSYIKDFSQFTEAIL 272

Query: 312 RYVSYAEVATFYRRYLISQLKQKSRCI 392
           +Y+ ++++ + Y+ YLIS+LK++++C+
Sbjct: 273 KYIHHSKIQSHYQ-YLISKLKEENKCL 298


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 734,351,450
Number of Sequences: 1657284
Number of extensions: 14071634
Number of successful extensions: 26764
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 25891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26762
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70789333940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)