Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120495.Seq
         (745 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    24   1.7  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    24   1.7  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    24   1.7  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    24   1.7  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    24   1.7  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    24   1.7  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    24   1.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   7.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   7.0  

>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -1

Query: 325 PRALAPYCCRYKYGPRQFYD*ERNSYSINFSQDLLYKILNSYIVP 191
           P+ ++     YKY     Y+   N+Y+ N+ +   Y I+N   +P
Sbjct: 79  PKIISSLSNNYKYSNYNNYN---NNYNTNYKKLQYYNIINIEQIP 120


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -1

Query: 325 PRALAPYCCRYKYGPRQFYD*ERNSYSINFSQDLLYKILNSYIVP 191
           P+ ++     YKY     Y+   N+Y+ N+ +   Y I+N   +P
Sbjct: 79  PKIISSLSNNYKYSNYNNYN---NNYNTNYKKLQYYNIINIEQIP 120


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -1

Query: 325 PRALAPYCCRYKYGPRQFYD*ERNSYSINFSQDLLYKILNSYIVP 191
           P+ ++     YKY     Y+   N+Y+ N+ +   Y I+N   +P
Sbjct: 79  PKIISSLSNNYKYSNYNNYN---NNYNTNYKKLQYYNIINIEQIP 120


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -1

Query: 325 PRALAPYCCRYKYGPRQFYD*ERNSYSINFSQDLLYKILNSYIVP 191
           P+ ++     YKY     Y+   N+Y+ N+ +   Y I+N   +P
Sbjct: 79  PKIISSLSNNYKYSNYNNYN---NNYNTNYKKLQYYNIINIEQIP 120


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -1

Query: 325 PRALAPYCCRYKYGPRQFYD*ERNSYSINFSQDLLYKILNSYIVP 191
           P+ ++     YKY     Y+   N+Y+ N+ +   Y I+N   +P
Sbjct: 79  PKIISSLSNNYKYSNYNNYN---NNYNTNYKKLQYYNIINIEQIP 120


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -1

Query: 325 PRALAPYCCRYKYGPRQFYD*ERNSYSINFSQDLLYKILNSYIVP 191
           P+ ++     YKY     Y+   N+Y+ N+ +   Y I+N   +P
Sbjct: 79  PKIISSLSNNYKYSNYNNYN---NNYNTNYKKLQYYNIINIEQIP 120


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -1

Query: 325 PRALAPYCCRYKYGPRQFYD*ERNSYSINFSQDLLYKILNSYIVP 191
           P+ ++     YKY     Y+   N+Y+ N+ +   Y I+N   +P
Sbjct: 79  PKIISSLSNNYKYSNYNNYN---NNYNTNYKKLQYYNIINIEQIP 120


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +3

Query: 276  CRGPYL*RQQYGANARGYGAATNE 347
            C    L  + YG NARG    T E
Sbjct: 1888 CDRDQLVNRNYGVNARGKDGMTTE 1911


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 188 LFAGTTIFRFVRRKRLSHSYTYSER 114
           LFAGT    F    ++ + YTY  R
Sbjct: 9   LFAGTVAADFQHNWQVGNEYTYLVR 33


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,525
Number of Sequences: 438
Number of extensions: 4775
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)