Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120495.Seq
(745 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g20450.1 68417.m02984 leucine-rich repeat protein kinase, put... 37 0.012
At1g51805.1 68414.m05838 leucine-rich repeat protein kinase, put... 31 0.61
At4g29180.1 68417.m04175 leucine-rich repeat protein kinase, put... 31 0.81
At3g21340.1 68416.m02695 leucine-rich repeat protein kinase, put... 31 1.1
At5g16900.1 68418.m01981 leucine-rich repeat protein kinase, put... 30 1.4
At1g51910.1 68414.m05851 protein kinase family protein contains ... 30 1.4
At4g39370.2 68417.m05572 ubiquitin-specific protease 27, putativ... 30 1.9
At4g39370.1 68417.m05573 ubiquitin-specific protease 27, putativ... 30 1.9
At3g51440.1 68416.m05634 strictosidine synthase family protein s... 30 1.9
At4g19040.1 68417.m02805 pleckstrin homology (PH) domain-contain... 29 3.3
At1g51890.1 68414.m05849 leucine-rich repeat protein kinase, put... 29 4.3
At1g51840.1 68414.m05844 protein kinase-related contains similar... 29 4.3
At1g49100.1 68414.m05505 leucine-rich repeat protein kinase, put... 29 4.3
At1g76955.1 68414.m08959 Expressed protein 28 7.5
At1g07550.1 68414.m00808 leucine-rich repeat protein kinase, put... 28 7.5
At5g62680.1 68418.m07866 proton-dependent oligopeptide transport... 27 9.9
At3g42200.1 68416.m04342 hypothetical protein several hypothetic... 27 9.9
At1g51870.1 68414.m05847 protein kinase family protein contains ... 27 9.9
At1g51860.1 68414.m05846 leucine-rich repeat protein kinase, put... 27 9.9
>At4g20450.1 68417.m02984 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 898
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = -1
Query: 280 RQFYD*ERNSYSINFSQDLLYKILNSYIVPNYSLAQQ-YFDLYDENGFRTRIPIQSACNN 104
R F + RN Y++ Q Y I ++ NY L Q+ FDLY F T I +Q
Sbjct: 87 RYFPEGARNCYNLTVMQGTHYLIRAVFVYGNYDLKQRPKFDLYLGPNFWTTINLQDPSGG 146
Query: 103 IISSVKKTNSKHKKFVYWPKDTNALVPLV 17
+ + ++ ++ PK N + LV
Sbjct: 147 FYYRIWLQDGTVEEVIHMPKSNNLDICLV 175
>At1g51805.1 68414.m05838 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 884
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 280 RQFYD*ERNSYSINFSQDLLYKILNSYIVPNYS--LAQQYFDLY 155
R F D RN Y++N S+D Y I +++ NY + FDLY
Sbjct: 80 RYFPDGARNCYNLNVSRDTNYMIKATFVYGNYDGHKDEPNFDLY 123
>At4g29180.1 68417.m04175 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 911
Score = 31.1 bits (67), Expect = 0.81
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -1
Query: 280 RQFYD*ERNSYSINFSQDL--LYKILNSYIVPNYS--LAQQYFDLYDENGFRTRIPIQSA 113
R F RN Y++ S LY I S++ NY A FDLY F T + +++A
Sbjct: 85 RSFPQGNRNCYTLTPSDGKGNLYLIRASFMYGNYDGKNALPEFDLYVNVNFWTSVKLRNA 144
Query: 112 CNNIISSV 89
N+I +
Sbjct: 145 SENVIKEI 152
>At3g21340.1 68416.m02695 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 880
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = -1
Query: 280 RQFYD*ERNSYSINFSQDLLYKILNSYIVPNYSLAQQ--YFDLYDENGFRTRIPIQSACN 107
R F D RN Y++N +QD Y I ++ NY FDLY + + N
Sbjct: 87 RYFPDGFRNCYTLNVTQDTNYLIKAVFVYGNYDGLNNPPSFDLYLGPNLWVTVDMNGRTN 146
Query: 106 NIISS-VKKTNSK 71
I + KT SK
Sbjct: 147 GTIQEIIHKTISK 159
>At5g16900.1 68418.m01981 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 866
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = -1
Query: 280 RQFYD*ERNSYSINFSQDLLYKILNSYIVPNYSLAQQY--FDLYDENGFRTRIPIQSACN 107
R F D RN Y+++ Q+ Y I ++ NY Y FDLY R+ ++ N
Sbjct: 78 RYFPDGLRNCYTLDVLQNRRYMIKAVFVYGNYDGYNDYPSFDLYLGPNKWVRVDLEGKVN 137
Query: 106 NIISSVKKTNSKHKKFVYWPKDTNAL 29
+ + S + + K N+L
Sbjct: 138 GSVEEIIHIPSSNSLQICLVKTGNSL 163
>At1g51910.1 68414.m05851 protein kinase family protein contains
Serine/Threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 876
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -1
Query: 280 RQFYD*ERNSYSINFSQDLLYKILNSYIVPNYSLAQQY--FDLYDENGFRTRIPIQSACN 107
R F + +RN Y+ N +L Y I +++ NY Q FDL+ T + ++ N
Sbjct: 83 RSFPEGQRNCYNFNLKANLKYLIRGTFVYGNYDGLNQMPKFDLHIGPNKWTSVILEGVAN 142
Query: 106 NIISSV 89
I +
Sbjct: 143 ATIFEI 148
>At4g39370.2 68417.m05572 ubiquitin-specific protease 27, putative
(UBP27) similar to GI:11993494; ubiquitin specific
protease 66 - Gallus gallus,PID:g3800764
Length = 361
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 579 RILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVIC 701
R ++ + T+Y + FNL S A + + HLI + +E + V+C
Sbjct: 147 RKVMVTLTDYAKNFNLTSQQDAAEALLHLISSLQEEI-VVC 186
>At4g39370.1 68417.m05573 ubiquitin-specific protease 27, putative
(UBP27) similar to GI:11993494; ubiquitin specific
protease 66 - Gallus gallus,PID:g3800764
Length = 494
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 579 RILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVIC 701
R ++ + T+Y + FNL S A + + HLI + +E + V+C
Sbjct: 147 RKVMVTLTDYAKNFNLTSQQDAAEALLHLISSLQEEI-VVC 186
>At3g51440.1 68416.m05634 strictosidine synthase family protein
similar to hemomucin [Drosophila
melanogaster][GI:1280434], strictosidine synthase
[Rauvolfia serpentina][SP|P15324]; contains
strictosidine synthase domain PF03088
Length = 371
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +1
Query: 424 AYHDDGWFI---CNSHLIKRFKMSKMVLPIFAKTTINSK*RSLGI*LEIKKEV 573
AYH+D FI C +KR K+++ V + +N+ R LGI I EV
Sbjct: 74 AYHEDSGFIYTGCVDGWVKRVKVAESVNDSLVEDLVNTGGRPLGIAFGIHGEV 126
>At4g19040.1 68417.m02805 pleckstrin homology (PH) domain-containing
protein / lipid-binding START domain-containing protein
contains Pfam profiles PF01852: START domain, PF00169:
PH domain
Length = 718
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -1
Query: 238 FSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQ-SACNNIISSVKKTNSKHK 65
F Q L ++LNS + +++F DE G TRIP+ + ++ +S K S HK
Sbjct: 371 FQQHCLLQMLNSV-----AGLREWFSQTDERGVHTRIPVMVNMASSSLSLTKSGKSLHK 424
>At1g51890.1 68414.m05849 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 888
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -1
Query: 280 RQFYD*ERNSYSINFSQDLLYKILNSYIVPNYSLAQQY--FDLYDENGFRTRIPIQSACN 107
R F + +RN Y+ + + Y I ++I NY Q FDLY T + I N
Sbjct: 79 RSFPEGQRNCYNFSLTAKRKYLIRGTFIYGNYDGLNQLPSFDLYIGPNKWTSVSIPGVRN 138
Query: 106 NIISSV 89
+S +
Sbjct: 139 GSVSEM 144
>At1g51840.1 68414.m05844 protein kinase-related contains similarity
to light repressible receptor protein kinase
[Arabidopsis thaliana] gi|1321686|emb|CAA66376
Length = 180
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 280 RQFYD*ERNSYSINFSQDLLYKILNSYIVPNYS--LAQQYFDLY 155
R F D RN Y++N ++D Y I +++ NY FDLY
Sbjct: 80 RYFPDGIRNCYNLNVTRDTNYLIKATFVYGNYDGLNVDPNFDLY 123
>At1g49100.1 68414.m05505 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 888
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 280 RQFYD*ERNSYSINFSQDLLYKILNSYIVPNY 185
R F D ERN Y++N +Q Y I +++ NY
Sbjct: 84 RYFPDGERNCYNLNVTQGTNYLIRAAFLYGNY 115
>At1g76955.1 68414.m08959 Expressed protein
Length = 78
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -1
Query: 340 VAAPYPR-ALAPYCCRYKYGPRQFYD*ERNSYSIN 239
+ AP P+ L P CR G QF ERN Y IN
Sbjct: 44 IYAPVPKECLKPPYCRGPPGESQFVYNERNYYQIN 78
>At1g07550.1 68414.m00808 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 864
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -1
Query: 280 RQFYD*ERNSYSINFSQDLLYKILNSYIVPNYSLAQQ--YFDLYDENGFRTRIPIQSACN 107
R F D RN YS+N QD Y I + NY FDLY T I + + +
Sbjct: 83 RYFPDGIRNCYSLNVKQDTNYLIRVMFRYGNYDGLNNSPRFDLYLGPNIWTTIDMGKSGD 142
Query: 106 NIISSV 89
++ +
Sbjct: 143 GVLEEI 148
>At5g62680.1 68418.m07866 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 616
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 388 ACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPIFAKTTI 522
A +T + PD D W +C ++ K VLPI+ ++I
Sbjct: 320 AILTPEDKLQPDGKPADPWKLCTMQQVEEVKCIVRVLPIWFASSI 364
>At3g42200.1 68416.m04342 hypothetical protein several hypothetical
proteins - Arabidopsis thaliana
Length = 134
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 419 PTRIMTTDGLSATATSSNVLKCQKWF-CPFSRRRQSIQNDDR*AFSW 556
P R +G+ A + S++ CQ+++ C F+ + + ++ND+ F W
Sbjct: 24 PKRCWCREGVMALISKSDLNPCQRYYRCGFAAKHR-LRNDEH-TFKW 68
>At1g51870.1 68414.m05847 protein kinase family protein contains
Serine/Threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 837
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 280 RQFYD*ERNSYSINFSQDLLYKILNSYIVPNYSLAQQ--YFDLY 155
R F + ERN Y+ N + + Y I +++ NY Q FDL+
Sbjct: 83 RSFPEGERNCYNFNLTVNSTYLIRGTFLYGNYDGLNQSPSFDLH 126
>At1g51860.1 68414.m05846 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 890
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 280 RQFYD*ERNSYSINFSQDLLYKILNSYIVPNYSLAQQY--FDLY 155
R F +RN Y++N + + Y I +++ NY Q+ FDL+
Sbjct: 83 RSFPVGQRNCYNVNLTANNKYLIRGTFVYGNYDGLNQFPSFDLH 126
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,392,784
Number of Sequences: 28952
Number of extensions: 297647
Number of successful extensions: 697
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1643603136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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