Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120494.Seq
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   1.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.8  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   4.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   6.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.4  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.4  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 607 WYICVIIGLQMPSNSFCLCSYS 542
           WYIC  IG+ +     CLC +S
Sbjct: 40  WYICYTIGVIITIG--CLCIWS 59


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +2

Query: 149 FELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEK 253
           +   G+  A   V  I+   D+D NG  N + ++K
Sbjct: 56  YSFIGVNDADWSVLVIDPELDVDQNGFRNFTNLKK 90



 Score = 21.8 bits (44), Expect = 4.8
 Identities = 11/46 (23%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
 Frame = +3

Query: 477 DHPRQVQRHHQWLASNQLADKEEYEHKQKELEGIC---NPIITQMY 605
           + P  VQ    W+ S        +     +  G+C   NP+I  +Y
Sbjct: 346 EDPESVQIKMDWIKSKGYGGAMTWAIDMDDFHGLCGPKNPLINILY 391


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 415 SMKSTMEDEKLKEKISDSD 471
           S+ S  EDE+++ ++SD D
Sbjct: 18  SLLSKKEDEEVEHRLSDRD 36


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +1

Query: 484 LDKCNDTISGWLPTNWP 534
           LDK N  +  W  + WP
Sbjct: 469 LDKKNVVVQSWGASQWP 485


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 157 QLEFTEQVVIFGHSTLTLKYLDEYSGLV 74
           Q    +QV  F HS  ++ +L E  GLV
Sbjct: 362 QYVMQQQVKNFRHSVRSVFFLSEIFGLV 389


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -1

Query: 468 RVRDLFLELLIL 433
           RV+DLFLE ++L
Sbjct: 581 RVKDLFLEAVLL 592


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 343 KYRNEDDKQKETIQAKNALESY 408
           ++ N D  Q+ + +  NA ESY
Sbjct: 365 QFNNSDFVQRNSTEFDNATESY 386


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,981
Number of Sequences: 336
Number of extensions: 2879
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)