Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120494.Seq
(627 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 133 2e-32
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 132 5e-32
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 112 5e-26
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 91 1e-19
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 79 7e-16
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 33 0.034
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.059
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 0.10
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 31 0.14
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.14
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.55
SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation fac... 29 0.73
SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription fact... 28 0.96
SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr ... 28 0.96
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 1.7
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 2.2
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 2.2
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 2.2
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 2.2
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 3.9
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 3.9
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 3.9
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 3.9
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 3.9
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 3.9
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 3.9
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 26 5.1
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 26 5.1
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 5.1
SPBC4F6.09 |str1||siderophore-iron transporter Str1 |Schizosacch... 26 5.1
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 5.1
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 25 6.8
SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase... 25 6.8
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 25 6.8
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce... 25 6.8
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 25 6.8
SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|ch... 25 6.8
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 25 9.0
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 25 9.0
SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2 family|Schizosaccharo... 25 9.0
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 25 9.0
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 25 9.0
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 133 bits (321), Expect = 2e-32
Identities = 65/84 (77%), Positives = 68/84 (80%)
Frame = +2
Query: 2 MTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPR 181
MT LIKRN YSDNQPGVLIQVFEGERA TKD NLLGKFEL+GIPPAPR
Sbjct: 408 MTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPR 467
Query: 182 GVPQIEVTFDIDANGILNVSAIEK 253
GVPQIEVTFD+DANGILNVSA+EK
Sbjct: 468 GVPQIEVTFDVDANGILNVSALEK 491
Score = 107 bits (258), Expect = 1e-24
Identities = 51/91 (56%), Positives = 68/91 (74%)
Frame = +1
Query: 256 TNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 435
T K KITITNDKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S++++++
Sbjct: 493 TGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLD 552
Query: 436 DEKLKEKISDSDKQTILDKCNDTISGWLPTN 528
D LK+K+ SDK+T+ +TI WL +N
Sbjct: 553 DPNLKDKVDASDKETVDKAVKETIE-WLDSN 582
Score = 52.4 bits (120), Expect = 5e-08
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +3
Query: 486 RQVQRHHQWLASNQLADKEEYEHKQKELEGICNPIITQMYQGAGGVP 626
+ V+ +WL SN A K+E+E KQKELE + NPI+ ++YQ AGG P
Sbjct: 570 KAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ-AGGAP 615
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 132 bits (318), Expect = 5e-32
Identities = 64/84 (76%), Positives = 68/84 (80%)
Frame = +2
Query: 2 MTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPR 181
MT LIKRN Y+DNQPGVLIQVFEGERA TKD NLLGKFEL+GIPPAPR
Sbjct: 408 MTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPR 467
Query: 182 GVPQIEVTFDIDANGILNVSAIEK 253
GVPQIEVTFD+DANGILNVSA+EK
Sbjct: 468 GVPQIEVTFDVDANGILNVSALEK 491
Score = 106 bits (255), Expect = 2e-24
Identities = 51/91 (56%), Positives = 67/91 (73%)
Frame = +1
Query: 256 TNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 435
T K KITITNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S++++++
Sbjct: 493 TGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLD 552
Query: 436 DEKLKEKISDSDKQTILDKCNDTISGWLPTN 528
D LK+K+ SDK+ I +TI WL N
Sbjct: 553 DPNLKDKVDASDKEAIDKAVKETIE-WLDHN 582
Score = 54.8 bits (126), Expect = 1e-08
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +3
Query: 486 RQVQRHHQWLASNQLADKEEYEHKQKELEGICNPIITQMYQGAGGVP 626
+ V+ +WL N A K+EYE KQKELEG+ NPI+ ++YQ AGG P
Sbjct: 570 KAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ-AGGAP 615
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 112 bits (269), Expect = 5e-26
Identities = 54/84 (64%), Positives = 62/84 (73%)
Frame = +2
Query: 2 MTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPR 181
MT LI RN DNQ VLIQV+EGER +TKDNNLLGKF+L GIPPAPR
Sbjct: 437 MTKLIGRNTPIPTRKSQIFSTAVDNQNTVLIQVYEGERTLTKDNNLLGKFDLRGIPPAPR 496
Query: 182 GVPQIEVTFDIDANGILNVSAIEK 253
GVPQIEVTF++DANG+L VSA++K
Sbjct: 497 GVPQIEVTFEVDANGVLTVSAVDK 520
Score = 88.2 bits (209), Expect = 8e-19
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Frame = +1
Query: 262 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM-ED 438
K K+ I NDKGRLS+E+IERMV EAE++ ED KE I+A+N LE+Y +S+K +D
Sbjct: 525 KPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDD 584
Query: 439 EKLKEKISDSDKQTILDKCNDTISGWL 519
E+L K+ DKQ +LD D ++ WL
Sbjct: 585 EQLGGKVDPEDKQAVLDAVED-VAEWL 610
Score = 31.1 bits (67), Expect = 0.14
Identities = 14/39 (35%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Frame = +3
Query: 507 QWLASN-QLADKEEYEHKQKELEGICNPIITQMY-QGAG 617
+WL + + A KEE+E ++++L+ + +PI ++Y +GAG
Sbjct: 608 EWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLYSEGAG 646
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 91.1 bits (216), Expect = 1e-19
Identities = 43/83 (51%), Positives = 56/83 (67%)
Frame = +2
Query: 5 TTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRG 184
T LI RN +D Q V I+VF+GER + +DN L+G F+LTGI PAP+G
Sbjct: 452 TRLINRNTTIPTRKSQVFSTAADGQTAVEIRVFQGERELVRDNKLIGNFQLTGIAPAPKG 511
Query: 185 VPQIEVTFDIDANGILNVSAIEK 253
PQIEV+FD+DA+GI+NVSA +K
Sbjct: 512 QPQIEVSFDVDADGIINVSARDK 534
Score = 54.8 bits (126), Expect = 1e-08
Identities = 30/84 (35%), Positives = 46/84 (54%)
Frame = +1
Query: 250 EVTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 429
+ TNK++ IT+ G L+ EIE MV +AEKYR D +KE I+ N ES C ++S
Sbjct: 534 KATNKDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESN 592
Query: 430 MEDEKLKEKISDSDKQTILDKCND 501
++ K+K+ + + K D
Sbjct: 593 LDIH--KDKLDQQAVEDLRSKITD 614
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 78.6 bits (185), Expect = 7e-16
Identities = 34/62 (54%), Positives = 46/62 (74%)
Frame = +2
Query: 68 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAI 247
+DNQ V V++GER +N LG+F+LTGIPP PRG ++E TF++DANGIL V+A+
Sbjct: 435 ADNQTTVTFPVYQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAV 494
Query: 248 EK 253
EK
Sbjct: 495 EK 496
Score = 54.4 bits (125), Expect = 1e-08
Identities = 24/78 (30%), Positives = 45/78 (57%)
Frame = +1
Query: 250 EVTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 429
+ T + I ITN G LS +I+ M+ A+K++ +D + ++AK+ LESY ++++T
Sbjct: 496 KTTGRSAHIEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETT 555
Query: 430 MEDEKLKEKISDSDKQTI 483
+ + + K+ DK I
Sbjct: 556 ISEPNVMMKLKRGDKSKI 573
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 33.1 bits (72), Expect = 0.034
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 229 PQRFRYREVTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALES 405
P + R + K ++++ + RL E +E+ EAE DK ET+ KNALE
Sbjct: 527 PVKMRKVKKLVKVADLSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEE 585
Query: 406 YCFSMKSTMED 438
Y + ++ ++D
Sbjct: 586 YIYDTRAKLDD 596
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.059
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = +1
Query: 310 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 489
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 490 K 492
K
Sbjct: 79 K 79
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 31.5 bits (68), Expect = 0.10
Identities = 20/84 (23%), Positives = 45/84 (53%)
Frame = +1
Query: 220 QRYPQRFRYREVTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNAL 399
++Y ++ + E+ +++ +K +KEE+E +NE + E ++Q + ++N
Sbjct: 1581 KQYYEKEKETEILAARSELVAEKEK---TKEELENQLNEKSQRIKELEEQAQKNSSENTH 1637
Query: 400 ESYCFSMKSTMEDEKLKEKISDSD 471
++ +K +E EKLKE ++ D
Sbjct: 1638 DNIDDMIKQQVE-EKLKENSANFD 1660
Score = 27.1 bits (57), Expect = 2.2
Identities = 19/77 (24%), Positives = 38/77 (49%)
Frame = +1
Query: 247 REVTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 426
+E+TNK ++T N + ++EIE + + + + E I K E +KS
Sbjct: 1437 QELTNKNKELTSKNAENEAMQKEIESLKDSNHQLQESASSDAEQI-TKEQFE----QLKS 1491
Query: 427 TMEDEKLKEKISDSDKQ 477
E E+ +++++DS +
Sbjct: 1492 --EKERTEKELADSKNE 1506
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 31.1 bits (67), Expect = 0.14
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = +1
Query: 259 NKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED 438
NK+ K T D SKEE+E +V E E D +Q + K+ L++ F ++
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KN 579
Query: 439 EKLKEKISD 465
KLK+K S+
Sbjct: 580 RKLKKKASN 588
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.1 bits (67), Expect = 0.14
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +1
Query: 292 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 471
+GR + + N+ E + DDKQ + KN+LE+ M+ + E K D +
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDN 1317
Query: 472 KQTILDKCND 501
+ LDK D
Sbjct: 1318 EMEDLDKMED 1327
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.55
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 292 KGRLSKEEIERMVNEAEKYRNEDD 363
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation factor
CPSF-73 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 797
Score = 28.7 bits (61), Expect = 0.73
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +1
Query: 250 EVTNKENKITITN-DKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNAL 399
EV++ K+ I+ + KEE+E+ + +K RNE+ K+ KET+ NAL
Sbjct: 664 EVSHMLAKVEISKPSEEEDKKEEVEK--KDGDKERNEEKKEEKETLPVLNAL 713
>SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription factor
Grt1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 648
Score = 28.3 bits (60), Expect = 0.96
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 199 GHLRHRCQRYPQRFRYREVTNKENKITITNDKGRLSKEEIERM-VNEAEKYRNEDD 363
G + CQ+Y + YR+ K ++ ND ++ E+M + E RN +D
Sbjct: 27 GDVCFECQKYNENCVYRQFYRKIKRLKYNNDNSKIDNFSNEQMNIPEFISVRNLND 82
>SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 377
Score = 28.3 bits (60), Expect = 0.96
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +1
Query: 379 IQAKNA-LESYCFSMKS---TMEDEKLKEKISDSDKQTILDKCNDTISGWLPTNW 531
+QA+ A LESY ++ T+ + K+++++SD KQ + I+G T W
Sbjct: 114 LQARKANLESYRAKLEKEYKTLAENKIQQRLSDGTKQLVTIDGLQYITGVSDTKW 168
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 27.5 bits (58), Expect = 1.7
Identities = 17/62 (27%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +1
Query: 253 VTNKENKITITNDKGRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 429
+ + ++++TIT++ S E++E++ N AEK + E + K + ++ LES S +
Sbjct: 284 INDLKSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRREL 339
Query: 430 ME 435
+E
Sbjct: 340 LE 341
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.1 bits (57), Expect = 2.2
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -1
Query: 240 ETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARSPS 103
E L PLA MS TSI G G GG P + + + + +SPS
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFPRMNRRQRRRMG-IFDQSPS 120
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 27.1 bits (57), Expect = 2.2
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Frame = +1
Query: 199 GHLRHRCQRYPQRFRYREVTNKENKITITNDKGRLSKEEIERMVNE----AEKYRNE--- 357
G LR +R ++F E T +EN+ +I+ L KEE+E++ +E +E+Y ++
Sbjct: 570 GKLRTEAEREIEKF---EKTIRENEESIS-----LFKEEVEKLTDEITQLSERYNDKCHE 621
Query: 358 -DDKQK--ETIQAKN--ALESYCFSMKSTMEDEKLKEKISDS 468
D+ QK +T++ +N A E + +E K+ E DS
Sbjct: 622 FDELQKRLQTLEEENNKAKEDSTSKTSNLLEQLKMTEAEVDS 663
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +1
Query: 355 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIS 510
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ +S
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLS 286
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 325 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 429
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.2 bits (55), Expect = 3.9
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = +1
Query: 307 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 459
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 460 SDSDKQTILDKCND 501
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 3.9
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 310 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 480
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 3.9
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 286 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 462
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 463 DSDKQT 480
+D+ T
Sbjct: 695 -TDRLT 699
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.2 bits (55), Expect = 3.9
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 274 ITITND-KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 450
I + D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 451 EKISDSDKQTILDKC 495
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 3.9
Identities = 24/93 (25%), Positives = 46/93 (49%)
Frame = +1
Query: 232 QRFRYREVTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYC 411
Q RY E+ K+ +NDK LS EE +++ A Y+N ++ + + +++E
Sbjct: 17 QAERYEEMVENMKKVACSNDK--LSVEE-RNLLSVA--YKNIIGARRASWRIISSIEQKE 71
Query: 412 FSMKSTMEDEKLKEKISDSDKQTILDKCNDTIS 510
S +T + +KE + + + D C+D +S
Sbjct: 72 ESRGNTRQAALIKEYRKKIEDE-LSDICHDVLS 103
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 3.9
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 24 TLPSPLNRLRHSPPTLITNPEYSSKYLR 107
T P RLRH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +1
Query: 304 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 426
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 25.8 bits (54), Expect = 5.1
Identities = 14/49 (28%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 310 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKE 453
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKE 538
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 25.8 bits (54), Expect = 5.1
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = -3
Query: 244 SGNVEDTVGIDVEGDLNLRHATRRRWDPGQLEFTEQVVIFGH--STLTLKYLDEYSGLVI 71
+GN +D+ L+ RR+D G + F + + FG + T + Y+
Sbjct: 361 NGNQVKPTKLDLFSSGELKIFMNRRFDQGMVAFLDYLHQFGDFCAAKTPSAVLPYAIEND 420
Query: 70 RVGGECLSL-FSGDGSVT 20
R+GG+C+ L F+ D + T
Sbjct: 421 RIGGKCIRLAFNQDENWT 438
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 5.1
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 292 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 402
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPBC4F6.09 |str1||siderophore-iron transporter Str1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 612
Score = 25.8 bits (54), Expect = 5.1
Identities = 15/71 (21%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 352 NEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTI--LDKCNDTISGWLPT 525
+E+DK ++ IQ + +++ +++ ++EK+ + + +I K D +SG +
Sbjct: 22 SEEDKLEKNIQDETSIKEVSLQDAKQSDEKGVEEKVFNDESFSIDVAPKPEDELSGIVKA 81
Query: 526 NWPTRRSMSTS 558
+ T S S
Sbjct: 82 RYLTEHSSRIS 92
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 5.1
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = +1
Query: 307 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 486
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 487 D 489
D
Sbjct: 451 D 451
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 6.8
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +1
Query: 307 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 486
+EE E+ + E K R + DK++E + + LE + + + K+ + + +
Sbjct: 694 REEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQTKEGS 753
Query: 487 DKC 495
D C
Sbjct: 754 DGC 756
>SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase
Gpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1448
Score = 25.4 bits (53), Expect = 6.8
Identities = 10/36 (27%), Positives = 14/36 (38%)
Frame = +1
Query: 463 DSDKQTILDKCNDTISGWLPTNWPTRRSMSTSRKNW 570
DSD + + C D I W +W + NW
Sbjct: 394 DSDFKFVKFHCQDDIEDWKAIHWVNEIESNPKYDNW 429
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 25.4 bits (53), Expect = 6.8
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 268 NKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEK 444
NK+ + G + + E E EAE ++ ++D+ ++E ++ L S S E+E+
Sbjct: 187 NKVLAARE-GLIDEGEEEEEREEAELEFVSDDEDEEEISDLEDWLGSDQSMETSESEEEE 245
Query: 445 LKEKISDSDK 474
E SD D+
Sbjct: 246 SSESESDEDE 255
>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2310
Score = 25.4 bits (53), Expect = 6.8
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +1
Query: 214 RCQRYPQR--FRYREVTNKENK---ITITNDKGRLSKEEIERMVNEAEKY 348
R + P++ F+YR V N+ +T+T +KG + + +EA K+
Sbjct: 357 RVDKLPKQHLFKYRPVDNEATYCQVVTVTGEKGSGKSNLLNAVADEARKF 406
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 6.8
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +1
Query: 274 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 453
I +T + R S E V + E ++D + +++NA + S + + +KE
Sbjct: 240 IRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLSESSMKE 297
Query: 454 KISDSDKQTILDK 492
K S +K DK
Sbjct: 298 KQSKIEKYMKSDK 310
>SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 703
Score = 25.4 bits (53), Expect = 6.8
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 256 TNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK--ETIQAKNALESYCF 414
TNK N + N L EEI V + E + DD+ + E +A ++ E Y F
Sbjct: 47 TNKHNVYSTKNSMYLLGFEEILNTVLDCEPHIFTDDELRVIENFKALDSDERYLF 101
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.0 bits (52), Expect = 9.0
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +1
Query: 292 KGRLSKEEIERMVN---EAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 462
KG+ K+ +E N E EK + +A+ A + +E EK KEK
Sbjct: 221 KGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQNSAKLEKEKAKEKQK 280
Query: 463 DSDKQ--TILDK 492
D D++ T+ DK
Sbjct: 281 DKDQEQDTVSDK 292
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 25.0 bits (52), Expect = 9.0
Identities = 20/80 (25%), Positives = 32/80 (40%)
Frame = +1
Query: 262 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 441
K N D+ + +EE E ++EK ++ K + KNA ++ M DE
Sbjct: 85 KANAFEAFADEQSVEEEEEE----DSEKPVRKNKKSSKKASPKNAFDALADDMDDLSLDE 140
Query: 442 KLKEKISDSDKQTILDKCND 501
+ E S K+ K D
Sbjct: 141 EESESSEKSKKKKKKSKSKD 160
>SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 342
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -3
Query: 169 WDPGQLEFTEQVVIFGHSTLTLKYLDEYSGLVIRVGGECLS 47
WD G+ ++ I GHS +L L+ S L +S
Sbjct: 61 WDNGKFSLVDRFTIDGHSPTSLCVLENGSVLTANYNSASIS 101
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 25.0 bits (52), Expect = 9.0
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +1
Query: 301 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEK---ISDSD 471
++K + + +AEK R ED+++K Q ++ L+S+ K +K + ISD D
Sbjct: 213 IAKSKHYKAERQAEKERYEDEREKLDEQMED-LQSFLSDYKKASRKSGIKTQRPIISDGD 271
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 25.0 bits (52), Expect = 9.0
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 13/84 (15%)
Frame = +1
Query: 289 DKGRLSKEEIERMVNEAEKYR-NEDD--------KQKETIQAKNALESYCFSMKSTMED- 438
+ G K+ +R V +EK EDD K +T++A N S K +
Sbjct: 727 ESGSYLKDLPDRNVGNSEKVTFQEDDINSPKLQSKNNQTVEAVNTETSDKLQEKEANHEL 786
Query: 439 ---EKLKEKISDSDKQTILDKCND 501
EK++EK+++ DK ++ D D
Sbjct: 787 ENIEKIEEKLTEVDKVSLSDAFPD 810
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,446,215
Number of Sequences: 5004
Number of extensions: 47785
Number of successful extensions: 245
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 277683324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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