Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120491.Seq
         (851 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    24   1.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   5.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.4  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   9.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.4  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/56 (21%), Positives = 25/56 (44%)
 Frame = +3

Query: 159 KDEILSLEPIIIFLTDGDPTVGEMNPKTIIKNSLKRITEVMKPRYFHLLSVRMRIP 326
           K ++  ++P + F T        +N +T     L  + +V +  Y H+  ++ R P
Sbjct: 37  KFDVNFIDPALQFCTHLIYGYAGINAETFKAQPLNELFDVTRDNYRHITELKRRFP 92


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 17/74 (22%), Positives = 31/74 (41%)
 Frame = +3

Query: 45  IIDRLEANGGTNIDAALGTAIDLIRNRSELFANSTSSNKDEILSLEPIIIFLTDGDPTVG 224
           ++ ++  N G +  +A  T+IDL   R   +  ++      +   E I    T+ +    
Sbjct: 12  VVSQINGNSGDSTSSA--TSIDLSTFRVPTYGTTSHPTSKLVPPDERITYSWTEINAFAN 69

Query: 225 EMNPKTIIKNSLKR 266
              PKT   N +KR
Sbjct: 70  VSPPKTKFFNLIKR 83


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 254 FAEKNYGSDEATIFSLAFGEDAD 322
           FA++  G DEAT   L     AD
Sbjct: 18  FAQEEEGGDEATADELCENRPAD 40


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 254 FAEKNYGSDEATIFSLAFGEDAD 322
           FA++  G DEAT   L     AD
Sbjct: 18  FAQEEEGGDEATADELCENRPAD 40


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 296 KISWLHHFRNSFQRIFNYCF 237
           KI  LHH  +   R+FN  F
Sbjct: 853 KICTLHHHLSKLIRLFNEIF 872


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,712
Number of Sequences: 336
Number of extensions: 3233
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)