Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120491.Seq
(851 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0304 - 16640937-16642877 33 0.38
11_06_0756 + 26952196-26952264,26952760-26953206,26954009-269553... 31 0.88
05_07_0073 - 27504169-27504882,27504989-27505161,27505302-275054... 31 1.5
12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047 30 2.7
11_06_0207 + 21214631-21216121 30 2.7
05_01_0173 - 1199668-1199685,1199907-1199969,1200277-1200379,120... 29 3.6
09_02_0212 + 5820866-5821031,5821172-5821224,5821512-5821639,582... 29 4.7
03_02_0928 + 12464325-12464498,12466494-12466679,12466929-124670... 29 4.7
12_02_0925 - 24398851-24398998,24399478-24399718,24399886-244005... 29 6.2
12_02_0078 + 13290432-13290924,13290998-13291201,13291290-132920... 29 6.2
09_04_0256 + 16148820-16148998,16149547-16150241,16150317-161505... 29 6.2
07_03_1652 - 28409097-28409165,28409788-28409911,28410317-284105... 29 6.2
07_03_0014 - 12428713-12428860,12429340-12429580,12429664-124303... 29 6.2
06_02_0186 + 12787866-12788055,12788575-12788642,12788864-127890... 29 6.2
05_01_0595 + 5344721-5345249,5349183-5349264,5349813-5350507,535... 29 6.2
03_03_0039 - 13986844-13986907,13987219-13987273,13987492-139876... 29 6.2
01_06_1640 + 38836977-38836988,38837694-38838047,38838164-388382... 29 6.2
01_05_0117 - 18300157-18301106,18301149-18301543,18302592-183026... 29 6.2
09_04_0625 - 19044775-19045078,19045178-19045382,19045534-190461... 28 8.2
07_03_0753 + 21251216-21251221,21251486-21251557,21251920-212522... 28 8.2
04_04_0463 - 25397837-25399693,25402136-25402405 28 8.2
01_01_1009 + 7992040-7992287,7992747-7993144,7993301-7993441,799... 28 8.2
>10_08_0304 - 16640937-16642877
Length = 646
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +3
Query: 6 SKATPENIARAKIIIDRLEANGGTNIDAALGTAIDLIRNRSELFANSTSS 155
S+ T A AK + L A GGTNI AAL A ++ +R L+ N+ S
Sbjct: 227 SRMTDAGKAHAKRAVGSLSARGGTNIGAALRKAAKVLDDR--LYRNAVES 274
>11_06_0756 +
26952196-26952264,26952760-26953206,26954009-26955358,
26955400-26955408
Length = 624
Score = 31.5 bits (68), Expect = 0.88
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +3
Query: 48 IDRLEANGGTNIDAALGTAIDLIRNRSELFANSTSSNKDEILSLEPIIIFLTDGDPTVG 224
IDRL+A GGT + AL A+ ++ R S+++ + I+ LTDGD T G
Sbjct: 152 IDRLQARGGTALMPALEEAVKILDERQ-------GSSRNHV----GFILLLTDGDDTTG 199
>05_07_0073 -
27504169-27504882,27504989-27505161,27505302-27505485,
27505604-27505675,27506173-27506733,27506846-27507145
Length = 667
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 365 ARHIYEASDAALQLRDFYRQVSSPLLSHV 451
A + A DA ++ RD+ + SPLLSHV
Sbjct: 470 AGEVASAEDATVRERDYIEPIKSPLLSHV 498
>12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047
Length = 524
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = +3
Query: 45 IIDRLEANGGTNIDAALGTAIDLIRNRSELFANSTSSNKDEILSLEPIIIFLTDGDPTVG 224
I+ L ANGGT+I A L + ++ +R +F S ++N L + + T GDPT
Sbjct: 127 IVKSLIANGGTDIKAGLDLGLAVLADR--VFTESRTAN--IFLMSDGKLEGKTSGDPT-- 180
Query: 225 EMNP 236
++NP
Sbjct: 181 QVNP 184
>11_06_0207 + 21214631-21216121
Length = 496
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Frame = +3
Query: 258 LKRITEVMKPRYFHLLSVR--MRIPSSCASCRSATTVLRDTSTRPQTRRCSCATSTDRSP 431
L +++ M F LL + +R S C S RSA T LRD Q C T+
Sbjct: 56 LPELSQDMLMEIFALLEIPDLVRAGSVCQSWRSAYTSLRDMGQYKQQTPCLLYTTESSGE 115
Query: 432 RLCCHMSNLSTHRIR 476
++ C S + R
Sbjct: 116 KVSCLYSLVEKRAFR 130
>05_01_0173 -
1199668-1199685,1199907-1199969,1200277-1200379,
1201408-1201514
Length = 96
Score = 29.5 bits (63), Expect = 3.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 293 ISWLHHFRNSFQRIFNYCFRVHF 225
+SW H +RN +CF +HF
Sbjct: 46 LSWQHEYRNLIVNTLAFCFNLHF 68
>09_02_0212 +
5820866-5821031,5821172-5821224,5821512-5821639,
5821728-5821833,5821998-5822132,5822211-5822262,
5822383-5822447,5823984-5824090,5824596-5824792,
5825145-5825260,5825368-5825453,5825525-5825597,
5826886-5826977,5827069-5827207,5827275-5827369,
5827804-5827978,5828345-5828491
Length = 643
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/84 (25%), Positives = 38/84 (45%)
Frame = +3
Query: 99 TAIDLIRNRSELFANSTSSNKDEILSLEPIIIFLTDGDPTVGEMNPKTIIKNSLKRITEV 278
+A+DL+ + L + +T N + L E + I + + +GEM P K ++K +T
Sbjct: 297 SAVDLLLIK-RLISETTKQNLLQFLQHEFVNISKSHAERLIGEMGPDFSAKTTVKSLTSQ 355
Query: 279 MKPRYFHLLSVRMRIPSSCASCRS 350
R H L + + +C S
Sbjct: 356 QLVR-IHQLFRQAKFDDPSGNCLS 378
>03_02_0928 +
12464325-12464498,12466494-12466679,12466929-12467021,
12467212-12467394,12467506-12467608,12467695-12467865,
12468086-12469084,12469178-12469254,12469485-12470337,
12470878-12471000,12471526-12471878
Length = 1104
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = -1
Query: 371 VAQNRCCGATTCAGAWDPHPHRKQVKISWLHHFRNSFQRIFNY--CFRVHFTNSRIAIRQ 198
V Q CC A TC +P H + + LH F +S Y + TNS I +
Sbjct: 465 VEQASCCTAETCHANEEPSMHPQVYPNNTLHTFYSSLANNLEYSKSGQSDMTNSSINVAH 524
Query: 197 E 195
E
Sbjct: 525 E 525
>12_02_0925 -
24398851-24398998,24399478-24399718,24399886-24400536,
24400625-24400828,24400902-24401583,24401678-24401934,
24402010-24402704,24403150-24403397
Length = 1041
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -1
Query: 359 RCCGATTCAGAWDPHPH-RKQVKISWLHHFRNSFQRIFNYCFRVHFTNSRIAIRQEYDDG 183
+CC ++ C W +V+ H N + NY R+ + IR E DD
Sbjct: 719 QCCSSSGCERNWSTFAFVHTKVRNRLTHKKLNKLVYV-NYNLRLRIQQANAQIRVEDDDP 777
Query: 182 LQR 174
LQR
Sbjct: 778 LQR 780
>12_02_0078 +
13290432-13290924,13290998-13291201,13291290-13292024,
13292108-13292499
Length = 607
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -1
Query: 359 RCCGATTCAGAWDPHPH-RKQVKISWLHHFRNSFQRIFNYCFRVHFTNSRIAIRQEYDDG 183
+CC ++ C W +V+ H N + NY R+ + +R E DD
Sbjct: 256 QCCSSSGCERNWSTFAFVHTKVRNRLTHKKLNKLVYV-NYNLRLRIRRANAQVRTEDDDP 314
Query: 182 LQR 174
LQR
Sbjct: 315 LQR 317
>09_04_0256 +
16148820-16148998,16149547-16150241,16150317-16150573,
16150668-16151349,16151423-16151626,16151715-16152449,
16152533-16152698,16153253-16153400
Length = 1021
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -1
Query: 359 RCCGATTCAGAWDPHPH-RKQVKISWLHHFRNSFQRIFNYCFRVHFTNSRIAIRQEYDDG 183
+CC ++ C W +V+ H N + NY R+ + IR E DD
Sbjct: 696 QCCSSSGCERNWSTFAFVHTKVRNRLTHKKLNKLVYV-NYNLRLRIQQANAQIRVEDDDP 754
Query: 182 LQR 174
LQR
Sbjct: 755 LQR 757
>07_03_1652 -
28409097-28409165,28409788-28409911,28410317-28410557,
28410641-28411375,28411464-28411667,28411741-28412422,
28412517-28412773,28412849-28413543,28414003-28414250
Length = 1084
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -1
Query: 359 RCCGATTCAGAWDPHPH-RKQVKISWLHHFRNSFQRIFNYCFRVHFTNSRIAIRQEYDDG 183
+CC ++ C W +V+ H N + NY R+ + IR E DD
Sbjct: 719 QCCSSSGCERNWSTFAFVHTKVRNRLTHKKLNKLVYV-NYNLRLRIQQANAQIRVEDDDP 777
Query: 182 LQR 174
LQR
Sbjct: 778 LQR 780
>07_03_0014 - 12428713-12428860,12429340-12429580,12429664-12430398,
12430487-12430690,12430764-12431445,12431540-12431796,
12431872-12432566,12433012-12433172,12434039-12434383,
12434399-12434631,12434656-12434740
Length = 1261
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -1
Query: 359 RCCGATTCAGAWDPHPH-RKQVKISWLHHFRNSFQRIFNYCFRVHFTNSRIAIRQEYDDG 183
+CC ++ C W +V+ H N + NY R+ + IR E DD
Sbjct: 911 QCCSSSGCERNWSTFAFVHTKVRNRLTHKKLNKLVYV-NYNLRLRIQQANAQIRVEDDDP 969
Query: 182 LQR 174
LQR
Sbjct: 970 LQR 972
>06_02_0186 +
12787866-12788055,12788575-12788642,12788864-12789007,
12789112-12789268,12789344-12789366,12789487-12789495,
12789694-12790108,12790449-12790652,12790741-12791201,
12791206-12791476,12791560-12791951
Length = 777
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = -1
Query: 359 RCCGATTCAGAWDPHPHRKQVKISWLHHFRNSFQRIFNYCFRVHFTNSRIAIRQEYDDGL 180
+CC + C W + L H + + NY R+ + IR E DD L
Sbjct: 427 QCCSFSGCERNWSTFAFVHTKVRNRLTHKKLNKLAYVNYNLRLRIQQANAQIRVEDDDPL 486
Query: 179 QR-QDFIF 159
QR D +F
Sbjct: 487 QRLADLLF 494
>05_01_0595 + 5344721-5345249,5349183-5349264,5349813-5350507,
5350583-5350839,5350934-5351615,5351689-5351892,
5351981-5352715,5352799-5353181
Length = 1188
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -1
Query: 359 RCCGATTCAGAWDPHPH-RKQVKISWLHHFRNSFQRIFNYCFRVHFTNSRIAIRQEYDDG 183
+CC ++ C W +V+ H N + NY R+ + IR E DD
Sbjct: 840 QCCSSSGCERNWSTFAFVHTKVRNRLTHKKLNKLVYV-NYNLRLRIQQANAQIRVEDDDP 898
Query: 182 LQR 174
LQR
Sbjct: 899 LQR 901
>03_03_0039 -
13986844-13986907,13987219-13987273,13987492-13987606,
13987652-13987774,13987962-13988015,13988352-13988411,
13988522-13988584,13988790-13988863,13989177-13989261,
13989376-13989456,13989764-13989856,13990275-13990339,
13990407-13990482,13990570-13990635,13991094-13991153,
13991233-13991322,13991755-13991817,13992502-13992625,
13993031-13993271,13993355-13993624,13993715-13994089,
13994178-13994381,13994455-13995136,13995231-13995279,
13995362-13995488,13995564-13996258,13996718-13996965
Length = 1433
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -1
Query: 359 RCCGATTCAGAWDPHPH-RKQVKISWLHHFRNSFQRIFNYCFRVHFTNSRIAIRQEYDDG 183
+CC ++ C W +V+ H N + NY R+ + IR E DD
Sbjct: 692 QCCSSSGCERNWSTFAFVHTKVRNRLTHKKLNKLVYV-NYNLRLRIQQANAQIRVEDDDP 750
Query: 182 LQR 174
LQR
Sbjct: 751 LQR 753
>01_06_1640 +
38836977-38836988,38837694-38838047,38838164-38838294,
38838554-38838860,38839036-38839349,38839507-38839645
Length = 418
Score = 28.7 bits (61), Expect = 6.2
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Frame = +3
Query: 174 SLEPIIIFLTDGDPTVGEMNPKTIIKNSLKRITEVMKPRYF--HLLSVRMRIPSSCASCR 347
++E +I DG T+G + ++ R H + +MR+P CA+C+
Sbjct: 289 AMEALIHICRDGCRTIGPRDQTLKSSQAVCRFPACKGIELLLRHFSACKMRVPGGCANCK 348
Query: 348 SATTVLRDTSTRPQTRRCSCATSTDRSPRLCCHMSNLSTHRIR 476
+L +R CS A T P LC H H R
Sbjct: 349 RIWQLL-----ELHSRMCS-ALETCHVP-LCRHFKEKMQHLSR 384
>01_05_0117 - 18300157-18301106,18301149-18301543,18302592-18302681,
18303723-18303836,18303903-18304046,18316147-18316312,
18316396-18317130,18317219-18317422,18317496-18318177,
18318272-18318528,18318604-18319298,18319345-18319382,
18319847-18319928,18320018-18320112,18320443-18320526,
18320601-18320891,18321521-18321853,18321948-18322150,
18322243-18322399,18322482-18322585,18322675-18322835,
18323511-18323824,18324317-18324589,18324666-18324967,
18325459-18325549,18326140-18326190,18326700-18326768,
18326926-18327017,18327082-18327148,18328582-18328746,
18329027-18329103,18329572-18329766,18330208-18330275,
18331081-18331172,18331399-18331522,18331608-18331705,
18332384-18332997,18333620-18333626
Length = 2892
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -1
Query: 359 RCCGATTCAGAWDPHPH-RKQVKISWLHHFRNSFQRIFNYCFRVHFTNSRIAIRQEYDDG 183
+CC ++ C W +V+ H N + NY R+ + IR E DD
Sbjct: 2052 QCCSSSGCERNWSTFAFVHTKVRNRLTHKKLNKLVYV-NYNLRLRIQQANAQIRVEDDDP 2110
Query: 182 LQR 174
LQR
Sbjct: 2111 LQR 2113
>09_04_0625 -
19044775-19045078,19045178-19045382,19045534-19046168,
19046334-19047391
Length = 733
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 359 RCCGATTCAGAWDPHPHRKQVKISWLHHFRNS 264
+CC AT C WD H KIS L R S
Sbjct: 588 QCCSATGCERNWDIFHHIHSRKISRLERSRLS 619
>07_03_0753 +
21251216-21251221,21251486-21251557,21251920-21252253,
21252596-21252733,21252811-21253202
Length = 313
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = -1
Query: 362 NRCCGATTCAGAWDPHPHRKQVKISWLHHFRNSFQRIFNYCFRVHFTNSRIAIRQEYDDG 183
++CC ++ C W + + L H + + NY R+ + +R++ DD
Sbjct: 231 DQCCSSSGCEWNWSTLASIHTMIRNKLTHNKLNKLVYVNYNLRLQIQQTNTQVRKDDDDP 290
Query: 182 LQR 174
LQR
Sbjct: 291 LQR 293
>04_04_0463 - 25397837-25399693,25402136-25402405
Length = 708
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +3
Query: 48 IDRLEANGGTNIDAALGTAIDLIRNRSELFANSTSS 155
I+ L A+GGTNI AL A+ +I +RS + NS S
Sbjct: 341 INSLGASGGTNIADALKKAMKVIEDRS--YKNSVCS 374
>01_01_1009 +
7992040-7992287,7992747-7993144,7993301-7993441,
7993517-7993773,7993868-7994169,7994342-7994580,
7994654-7994857,7994946-7995680,7995764-7996155
Length = 971
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = -1
Query: 359 RCCGATTCAGAWDPHPHRKQVKISWLHHFRNSFQRIFNYCFRVHFTNSRIAIRQEYDDGL 180
+CC ++ C W + L H + + NY R+ + IR E DD L
Sbjct: 620 QCCSSSGCERNWSTFAFVHTKVRNILTHKKLNKLVYVNYNLRLRIQQANAQIRVEDDDPL 679
Query: 179 QR 174
QR
Sbjct: 680 QR 681
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,340,093
Number of Sequences: 37544
Number of extensions: 386375
Number of successful extensions: 1163
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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