Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120489.Seq
         (850 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          26   1.3  
AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease pr...    24   5.1  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
 Frame = +3

Query: 387 DHDHARDHVLLTADLVRDLGPGLDRGHVHRLP------GKDGDKYSTAGKNSSSKRHVDE 548
           D D  RD +   +  V   G G DR    R        GK  DKY ++  + SS RH   
Sbjct: 585 DRDRDRDRMRSDSGKVGGGGGGYDRDDYRRTEKDYRGNGKH-DKYGSSRHSDSSSRHRSS 643

Query: 549 QRQPNKSQ 572
           + + ++S+
Sbjct: 644 KHERDRSR 651


>AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease
           protein.
          Length = 375

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = -3

Query: 788 VCCIVLMASNNCSANLSNMSVKSGNESVISE 696
           VCC   +   NC  ++  + +  GN++ + E
Sbjct: 81  VCCPAFVNEPNCGPSVFGVRIIGGNDTELGE 111


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 805,418
Number of Sequences: 2352
Number of extensions: 15226
Number of successful extensions: 43
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)