Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120488.Seq
(823 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M69106-1|AAA35870.1| 444|Homo sapiens Gata3 enhancer-binding pr... 31 3.8
M68891-1|AAA35868.1| 480|Homo sapiens GATA-binding protein prot... 31 5.0
BT006671-1|AAP35317.1| 480|Homo sapiens hypothetical protein MG... 31 5.0
BC051342-1|AAH51342.1| 480|Homo sapiens GATA binding protein 2 ... 31 5.0
BC015613-1|AAH15613.1| 480|Homo sapiens GATA binding protein 2 ... 31 5.0
BC002557-1|AAH02557.1| 480|Homo sapiens GATA binding protein 2 ... 31 5.0
AK126622-1|BAC86616.1| 1060|Homo sapiens protein ( Homo sapiens ... 31 5.0
AK093802-1|BAC04225.1| 675|Homo sapiens protein ( Homo sapiens ... 31 5.0
X58072-1|CAA41102.1| 443|Homo sapiens hGATA3 transcription fac... 31 6.7
X55122-1|CAA38916.1| 444|Homo sapiens hGATA-3 factor protein. 31 6.7
X55037-1|CAA38877.1| 443|Homo sapiens GATA-3 protein. 31 6.7
BC006793-1|AAH06793.1| 444|Homo sapiens GATA binding protein 3 ... 31 6.7
BC003070-1|AAH03070.1| 443|Homo sapiens GATA binding protein 3 ... 31 6.7
AY497006-1|AAR32096.1| 443|Homo sapiens GATA binding protein 3 ... 31 6.7
AL390294-3|CAH73143.1| 443|Homo sapiens GATA binding protein 3 ... 31 6.7
AL390294-2|CAH73144.1| 444|Homo sapiens GATA binding protein 3 ... 31 6.7
>M69106-1|AAA35870.1| 444|Homo sapiens Gata3 enhancer-binding
protein protein.
Length = 444
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 512 IWRKQPIAHFVCQRNDCGSTRR*NGSARLRKRAPRNGAAGQPHGGHCARRDSQT 673
+WR+ H++C+R CG + NG R + R +A + G CA + T
Sbjct: 274 LWRRDGTGHYLCRR--CGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTT 325
>M68891-1|AAA35868.1| 480|Homo sapiens GATA-binding protein
protein.
Length = 480
Score = 31.1 bits (67), Expect = 5.0
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 503 ANQIWRKQPIAHFVCQRNDCGSTRR*NGSARLRKRAPRNGAAGQPHGGHCARRDSQT 673
A +WR+ H++C N CG + NG R + R +A + G CA + T
Sbjct: 302 ATPLWRRDGTGHYLC--NACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQTTT 356
>BT006671-1|AAP35317.1| 480|Homo sapiens hypothetical protein
MGC2306 protein.
Length = 480
Score = 31.1 bits (67), Expect = 5.0
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 503 ANQIWRKQPIAHFVCQRNDCGSTRR*NGSARLRKRAPRNGAAGQPHGGHCARRDSQT 673
A +WR+ H++C N CG + NG R + R +A + G CA + T
Sbjct: 302 ATPLWRRDGTGHYLC--NACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQTTT 356
>BC051342-1|AAH51342.1| 480|Homo sapiens GATA binding protein 2
protein.
Length = 480
Score = 31.1 bits (67), Expect = 5.0
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 503 ANQIWRKQPIAHFVCQRNDCGSTRR*NGSARLRKRAPRNGAAGQPHGGHCARRDSQT 673
A +WR+ H++C N CG + NG R + R +A + G CA + T
Sbjct: 302 ATPLWRRDGTGHYLC--NACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQTTT 356
>BC015613-1|AAH15613.1| 480|Homo sapiens GATA binding protein 2
protein.
Length = 480
Score = 31.1 bits (67), Expect = 5.0
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 503 ANQIWRKQPIAHFVCQRNDCGSTRR*NGSARLRKRAPRNGAAGQPHGGHCARRDSQT 673
A +WR+ H++C N CG + NG R + R +A + G CA + T
Sbjct: 302 ATPLWRRDGTGHYLC--NACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQTTT 356
>BC002557-1|AAH02557.1| 480|Homo sapiens GATA binding protein 2
protein.
Length = 480
Score = 31.1 bits (67), Expect = 5.0
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 503 ANQIWRKQPIAHFVCQRNDCGSTRR*NGSARLRKRAPRNGAAGQPHGGHCARRDSQT 673
A +WR+ H++C N CG + NG R + R +A + G CA + T
Sbjct: 302 ATPLWRRDGTGHYLC--NACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQTTT 356
>AK126622-1|BAC86616.1| 1060|Homo sapiens protein ( Homo sapiens
cDNA FLJ44660 fis, clone BRACE3002344, weakly similar
to Vegetatible incompatibility protein HET-E-1. ).
Length = 1060
Score = 31.1 bits (67), Expect = 5.0
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 277 GRPAVFAPTHSAHYQIWRDSTDNEVQIALRHRITRMAFGGGHSSSAMHGQVR 432
GR V HS Q W + +AL H +A G SS+ H Q+R
Sbjct: 665 GRLVVVEDLHSGAQQHWSGHSAEISTLALSHSAQVLASASGRSSTTAHCQIR 716
>AK093802-1|BAC04225.1| 675|Homo sapiens protein ( Homo sapiens
cDNA FLJ36483 fis, clone THYMU2017601. ).
Length = 675
Score = 31.1 bits (67), Expect = 5.0
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 277 GRPAVFAPTHSAHYQIWRDSTDNEVQIALRHRITRMAFGGGHSSSAMHGQVR 432
GR V HS Q W + +AL H +A G SS+ H Q+R
Sbjct: 278 GRLVVVEDLHSGAQQHWSGHSAEISTLALSHSAQVLASASGRSSTTAHCQIR 329
>X58072-1|CAA41102.1| 443|Homo sapiens hGATA3 transcription factor
protein.
Length = 443
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 512 IWRKQPIAHFVCQRNDCGSTRR*NGSARLRKRAPRNGAAGQPHGGHCARRDSQT 673
+WR+ H++C N CG + NG R + R +A + G CA + T
Sbjct: 273 LWRRDGTGHYLC--NACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTT 324
>X55122-1|CAA38916.1| 444|Homo sapiens hGATA-3 factor protein.
Length = 444
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 512 IWRKQPIAHFVCQRNDCGSTRR*NGSARLRKRAPRNGAAGQPHGGHCARRDSQT 673
+WR+ H++C N CG + NG R + R +A + G CA + T
Sbjct: 274 LWRRDGTGHYLC--NACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTT 325
>X55037-1|CAA38877.1| 443|Homo sapiens GATA-3 protein.
Length = 443
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 512 IWRKQPIAHFVCQRNDCGSTRR*NGSARLRKRAPRNGAAGQPHGGHCARRDSQT 673
+WR+ H++C N CG + NG R + R +A + G CA + T
Sbjct: 273 LWRRDGTGHYLC--NACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTT 324
>BC006793-1|AAH06793.1| 444|Homo sapiens GATA binding protein 3
protein.
Length = 444
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 512 IWRKQPIAHFVCQRNDCGSTRR*NGSARLRKRAPRNGAAGQPHGGHCARRDSQT 673
+WR+ H++C N CG + NG R + R +A + G CA + T
Sbjct: 274 LWRRDGTGHYLC--NACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTT 325
>BC003070-1|AAH03070.1| 443|Homo sapiens GATA binding protein 3
protein.
Length = 443
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 512 IWRKQPIAHFVCQRNDCGSTRR*NGSARLRKRAPRNGAAGQPHGGHCARRDSQT 673
+WR+ H++C N CG + NG R + R +A + G CA + T
Sbjct: 273 LWRRDGTGHYLC--NACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTT 324
>AY497006-1|AAR32096.1| 443|Homo sapiens GATA binding protein 3
protein.
Length = 443
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 512 IWRKQPIAHFVCQRNDCGSTRR*NGSARLRKRAPRNGAAGQPHGGHCARRDSQT 673
+WR+ H++C N CG + NG R + R +A + G CA + T
Sbjct: 273 LWRRDGTGHYLC--NACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTT 324
>AL390294-3|CAH73143.1| 443|Homo sapiens GATA binding protein 3
protein.
Length = 443
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 512 IWRKQPIAHFVCQRNDCGSTRR*NGSARLRKRAPRNGAAGQPHGGHCARRDSQT 673
+WR+ H++C N CG + NG R + R +A + G CA + T
Sbjct: 273 LWRRDGTGHYLC--NACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTT 324
>AL390294-2|CAH73144.1| 444|Homo sapiens GATA binding protein 3
protein.
Length = 444
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 512 IWRKQPIAHFVCQRNDCGSTRR*NGSARLRKRAPRNGAAGQPHGGHCARRDSQT 673
+WR+ H++C N CG + NG R + R +A + G CA + T
Sbjct: 274 LWRRDGTGHYLC--NACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTT 325
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,050,010
Number of Sequences: 237096
Number of extensions: 2800794
Number of successful extensions: 6894
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6890
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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