Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120488.Seq
         (823 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2130|AAN13691.1| 1249|Drosophila melanogaster CG3992-PB...    31   1.4  
AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA...    30   4.4  
AE014134-3561|AAN11140.1|  600|Drosophila melanogaster CG31601-P...    29   7.7  

>AE014297-2130|AAN13691.1| 1249|Drosophila melanogaster CG3992-PB,
           isoform B protein.
          Length = 1249

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +2

Query: 500 VANQIWRKQPIAHFVCQRNDCGSTRR*NGSARLRKRAPRNGAAGQPHGGHCA 655
           ++  +WR+    H++C  N CG   + NG  R   + PR  +A +  G  C+
Sbjct: 740 ISTPLWRRDNTGHYLC--NACGLYMKMNGMNRPLIKQPRRLSASKRAGLSCS 789


>AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA
           protein.
          Length = 1860

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 16/51 (31%), Positives = 23/51 (45%)
 Frame = -2

Query: 300 GCKYSGSPCFATLSGDGAGFGRHAQTSICTCRRRGHVLPVHNLHILNCWRC 148
           G  YS S C A ++    G   +A  S  T R R  +LP+ +L  +    C
Sbjct: 801 GKSYSSSECLADVTMPSYGGNSYASRSKSTSRSRKSMLPIRDLSEMRTDEC 851


>AE014134-3561|AAN11140.1|  600|Drosophila melanogaster CG31601-PA
           protein.
          Length = 600

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 255 DGAGFGRHAQTSICTCRRRGHVLPVHNLHILNCWRCPWPQ 136
           DG  FG   + S  T ++  + +P+   HI NC  C W Q
Sbjct: 240 DGELFGEDNEVSSNTIKKEDNRMPICRYHIRNC--CIWGQ 277


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,428,152
Number of Sequences: 53049
Number of extensions: 923245
Number of successful extensions: 3004
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2995
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)