Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120487.Seq
         (845 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    25   1.00 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   7.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   7.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.3  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.3  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   9.3  

>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 596 SDFKKFYHRFKKEPKIKLFQ 655
           SDF+K Y +F    +I LFQ
Sbjct: 2   SDFQKLYQKFVNSIRILLFQ 21


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -3

Query: 192 KKICILLNLNFKHVIESSFDKNHIVAKLC 106
           K +C + N  F    E  F   HI  +LC
Sbjct: 638 KVVCYMTNWAFYRKAEGKFVPEHIDQRLC 666


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 827 IIDGVRNLFVFNFLRNALDG 768
           +ID  RN F  + +R  +DG
Sbjct: 222 MIDTARNFFPVDLIRKVVDG 241


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 437 YFLTLLYFALCVNTCSCTDVI 499
           YF+  L+F LC+    C  +I
Sbjct: 135 YFVVPLFFLLCIYYFYCAFII 155


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 602 FKKFYHRFKKEPKIKLFQ 655
           +KKFY +F K  K+ + +
Sbjct: 423 YKKFYEQFSKNIKLGIHE 440


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 505 KTYYVCTRTRINAKC 461
           K  Y+CT+TR +  C
Sbjct: 177 KAGYICTKTRASLIC 191


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 505 KTYYVCTRTRINAKC 461
           K  Y+CT+TR +  C
Sbjct: 177 KAGYICTKTRASLIC 191


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 312  YQVDERKTKKARMRQSHRQL 253
            Y +DE K +KAR+    ++L
Sbjct: 1245 YPIDENKEEKARIAADLKEL 1264


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 312  YQVDERKTKKARMRQSHRQL 253
            Y +DE K +KAR+    ++L
Sbjct: 1245 YPIDENKEEKARIAADLKEL 1264


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -3

Query: 204 NYYLKKICILLNLNFKHVI 148
           N Y+K++C L N ++K+ +
Sbjct: 199 NQYIKQVCKLNNGHYKNFL 217


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -3

Query: 204 NYYLKKICILLNLNFKHVI 148
           N Y+K++C L N ++K+ +
Sbjct: 24  NQYIKQVCKLNNGHYKNFL 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,150
Number of Sequences: 336
Number of extensions: 3461
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)