Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120487.Seq
         (845 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064391-1|AAH64391.1|  474|Homo sapiens coiled-coil domain cont...    31   4.0  
BC036757-1|AAH36757.2|  474|Homo sapiens coiled-coil domain cont...    31   4.0  
BC022284-1|AAH22284.1|  334|Homo sapiens Unknown (protein for IM...    31   4.0  
S72869-1|AAC60637.1|  585|Homo sapiens H4(D10S170) protein.            31   5.3  

>BC064391-1|AAH64391.1|  474|Homo sapiens coiled-coil domain
           containing 6 protein.
          Length = 474

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 14/78 (17%), Positives = 39/78 (50%)
 Frame = -1

Query: 485 TNTY*RKVQSIRGLKNIFYAPYTHRVDIINMDQFEQLINVSLLKSLIKTQIDENVSDNIK 306
           +NT  +K+Q+++  K      Y    + +  +   +L+ +   K+ ++  +++     + 
Sbjct: 113 SNTLFKKIQALQKEKETLAVNYEKEEEFLTNELSRKLMQLQHEKAELEQHLEQEQEFQVN 172

Query: 305 SMSEKLKRLECDNLTDSL 252
            + +K+K+LE D ++  L
Sbjct: 173 KLMKKIKKLENDTISKQL 190


>BC036757-1|AAH36757.2|  474|Homo sapiens coiled-coil domain
           containing 6 protein.
          Length = 474

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 14/78 (17%), Positives = 39/78 (50%)
 Frame = -1

Query: 485 TNTY*RKVQSIRGLKNIFYAPYTHRVDIINMDQFEQLINVSLLKSLIKTQIDENVSDNIK 306
           +NT  +K+Q+++  K      Y    + +  +   +L+ +   K+ ++  +++     + 
Sbjct: 113 SNTLFKKIQALQKEKETLAVNYEKEEEFLTNELSRKLMQLQHEKAELEQHLEQEQEFQVN 172

Query: 305 SMSEKLKRLECDNLTDSL 252
            + +K+K+LE D ++  L
Sbjct: 173 KLMKKIKKLENDTISKQL 190


>BC022284-1|AAH22284.1|  334|Homo sapiens Unknown (protein for
           IMAGE:4762273) protein.
          Length = 334

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 14/78 (17%), Positives = 39/78 (50%)
 Frame = -1

Query: 485 TNTY*RKVQSIRGLKNIFYAPYTHRVDIINMDQFEQLINVSLLKSLIKTQIDENVSDNIK 306
           +NT  +K+Q+++  K      Y    + +  +   +L+ +   K+ ++  +++     + 
Sbjct: 113 SNTLFKKIQALQKEKETLAVNYEKEEEFLTNELSRKLMQLQHEKAELEQHLEQEQEFQVN 172

Query: 305 SMSEKLKRLECDNLTDSL 252
            + +K+K+LE D ++  L
Sbjct: 173 KLMKKIKKLENDTISKQL 190


>S72869-1|AAC60637.1|  585|Homo sapiens H4(D10S170) protein.
          Length = 585

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 14/78 (17%), Positives = 38/78 (48%)
 Frame = -1

Query: 485 TNTY*RKVQSIRGLKNIFYAPYTHRVDIINMDQFEQLINVSLLKSLIKTQIDENVSDNIK 306
           +NT  +K+Q+++  K      Y    + +  +   +L+ +   K  ++  +++     + 
Sbjct: 113 SNTLFKKIQALQKEKETLAVNYEKEEEFLTNELSRKLMQLQHEKGELEQHLEQEQEFQVN 172

Query: 305 SMSEKLKRLECDNLTDSL 252
            + +K+K+LE D ++  L
Sbjct: 173 KLMKKIKKLENDTISKQL 190


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,609,063
Number of Sequences: 237096
Number of extensions: 1624647
Number of successful extensions: 3415
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3415
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)