Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120486.Seq
(776 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical pr... 32 0.53
U53181-12|AAA93490.1| 134|Caenorhabditis elegans Hypothetical p... 29 2.8
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 3.7
U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak k... 29 3.7
U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak k... 29 3.7
U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set (trithorax/... 29 4.9
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 29 4.9
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 29 4.9
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF038620-1|AAB93487.1| 256|Caenorhabditis elegans Hypothetical ... 28 8.6
>Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical
protein F42G4.3a protein.
Length = 603
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 536 IKSPIPYTNHPRLNIHFHQSPDAVLEGIRAGTKAPLSSEAPSAYRTP 676
I SP Y+N PR FH+ P+A L + +A LSS +P++ +P
Sbjct: 111 IPSPPTYSNQPRPLGDFHRDPNA-LSQFQQSREALLSSTSPTSNYSP 156
>U53181-12|AAA93490.1| 134|Caenorhabditis elegans Hypothetical
protein F36D4.6 protein.
Length = 134
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 193 TVSSTFD---HPFSTPVLRSYWHRTKSNSVTVQSLPNVSS 303
T SS F HPFS+P LR + T +V + S P V+S
Sbjct: 3 TYSSPFSRLLHPFSSPPLRPHQDSTTRQTVFIYSSPPVNS 42
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 444 ATPSSARITIGGLALMHQATLPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY 608
AT +S+ IT G + +T A+S+T+T S TP T S ++PY
Sbjct: 817 ATSTSSVITTGSTSAPQSST--AVSSTTTSPSTTTGSTPAPQSSTVASTTTVSPY 869
>U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform b protein.
Length = 422
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 190 GTVSSTFDHPFSTPVLRSYWHRTKS 264
G +++ F H S+P LR +WHR ++
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQT 330
>U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform a protein.
Length = 516
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 190 GTVSSTFDHPFSTPVLRSYWHRTKS 264
G +++ F H S+P LR +WHR ++
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQT 424
>U13875-5|AAA21163.1| 739|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
b protein.
Length = 739
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 539 KSPIPYTNHPRLNIHFHQSPDAVLEGIRAGTKAPLSSEAPSAYRTPSS 682
+ PIP +HP+ H H + +V + + + + SS AP+ RT S+
Sbjct: 82 QKPIP-KSHPKHQEHHHHAKASVSTPVHSSSTSRNSSVAPTPQRTVST 128
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 539 KSPIPYTNHPRLNIHFHQSPDAVLEGIRAGTKAPLSSEAPSAYRTPSS 682
+ PIP +HP+ H H + +V + + + + SS AP+ RT S+
Sbjct: 853 QKPIP-KSHPKHQEHHHHAKASVSTPVHSSSTSRNSSVAPTPQRTVST 899
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 539 KSPIPYTNHPRLNIHFHQSPDAVLEGIRAGTKAPLSSEAPSAYRTPSS 682
+ PIP +HP+ H H + +V + + + + SS AP+ RT S+
Sbjct: 850 QKPIP-KSHPKHQEHHHHAKASVSTPVHSSSTSRNSSVAPTPQRTVST 896
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 495 QATLPAISATSTRSSNPRFHTPTTPDLTSISINPLTPY 608
Q T+P + TST+++ TPTT +T+ + TPY
Sbjct: 86 QTTIPTTTPTSTQTT-----TPTTTTITTTPVPTTTPY 118
>AF038620-1|AAB93487.1| 256|Caenorhabditis elegans Hypothetical
protein H10D12.2 protein.
Length = 256
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = -3
Query: 720 LKIRTKPLLPIPIDEGVRYA-DGASDDNGALVP 625
LK + + L IP+ + + +A DGA +DNG+ +P
Sbjct: 147 LKNKLEDLEEIPVADPIEHAFDGAENDNGSDIP 179
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,711,888
Number of Sequences: 27780
Number of extensions: 333285
Number of successful extensions: 1165
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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