Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120483.Seq
         (840 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein A...    28   0.41 
AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5 prot...    26   1.6  
AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding pr...    25   3.8  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    24   5.0  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   5.0  
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    23   8.7  

>EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein AA
           protein.
          Length = 62

 Score = 27.9 bits (59), Expect = 0.41
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 346 SSSHQSLSFLWHHRSQMHRCFLQHHHFQQ 260
           +SS Q   F  HH+ Q +   + HHH QQ
Sbjct: 18  ASSSQRSPFHHHHQQQQNHQRMPHHHQQQ 46


>AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5
           protein.
          Length = 128

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 104 ADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESN 220
           +DA    K+    E+   E K+ PVKK P  K++  + N
Sbjct: 65  SDAREMMKKFKVGELIEAERKQIPVKKEPDWKMDQQDDN 103


>AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding
           protein AgamOBP14 protein.
          Length = 188

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = -1

Query: 312 ITVLRCIVAFFSITIFSRRTSGASSVPFSLPLLSAASTFLAGDFL 178
           I  L  ++   + T  +++ S    +P     + A STF+  DFL
Sbjct: 6   IATLTVLLVLLAGTASAKKASTIFGMPLQQDPVPATSTFIVSDFL 50


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 98  TMADAAVDKKEVAPEEVTSTEPKESPVKKSP 190
           T    AV      P E+  T+P  SP++ +P
Sbjct: 171 TNTTIAVQPAPTQPHELVGTDPLSSPLQAAP 201


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 816 RYYLRTVDKRFVPTSSEKTTIRKTAY 739
           RY + +    F+P  SE+  + KT Y
Sbjct: 15  RYCINSASIEFMPAGSERKDVCKTGY 40


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1

Query: 363 IKSHRFPLHTSLFLFCGITVLRCIVAFFSITI 268
           I  H F L T LF F  +T++  + A   + +
Sbjct: 202 IIQHSFELSTFLFFFAPMTMITILYALIGLKL 233


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 788,519
Number of Sequences: 2352
Number of extensions: 16191
Number of successful extensions: 40
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)