Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120483.Seq
(840 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61958-3|AAB03180.2| 149|Caenorhabditis elegans Hypothetical pr... 32 0.58
U97014-2|AAB52426.2| 151|Caenorhabditis elegans Histone h1 like... 31 0.77
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z78015-4|CAB01436.2| 149|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z92803-7|CAB07244.1| 445|Caenorhabditis elegans Hypothetical pr... 31 1.3
U40933-6|AAQ23123.1| 199|Caenorhabditis elegans C.elegans homeo... 31 1.3
U41534-4|AAB47596.1| 323|Caenorhabditis elegans Hypothetical pr... 29 4.1
U41011-9|AAA82292.1| 359|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF016684-4|AAB66208.1| 159|Caenorhabditis elegans Hypothetical ... 29 4.1
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 29 5.4
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 5.4
AF003383-3|ABO16467.1| 438|Caenorhabditis elegans Cyclophylin p... 29 5.4
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 5.4
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 5.4
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 5.4
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 29 5.4
Z78012-5|CAB01415.1| 590|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr... 28 7.2
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l... 28 7.2
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l... 28 7.2
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 28 7.2
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 28 7.2
AF016448-8|AAW30665.1| 536|Caenorhabditis elegans Smek (dictyos... 28 7.2
AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek (dictyos... 28 7.2
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 28 7.2
Z68880-9|CAA93099.1| 255|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z68879-12|CAA93091.1| 255|Caenorhabditis elegans Hypothetical p... 28 9.5
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 28 9.5
U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4 p... 28 9.5
AF078785-7|AAC27086.2| 295|Caenorhabditis elegans Serpentine re... 28 9.5
AF002198-6|AAF99938.1| 295|Caenorhabditis elegans Serpentine re... 28 9.5
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 28 9.5
>U61958-3|AAB03180.2| 149|Caenorhabditis elegans Hypothetical
protein C25A8.2 protein.
Length = 149
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +2
Query: 122 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPE 253
KKE P+E + K KS K + E NG EN D P+
Sbjct: 93 KKEEKPKEKSKKSAKSKKSSKSKKDKKDGEEENGYENCQDMTPD 136
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 92 LATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESN-GKENGTDE 244
LAT AA K+E P E E K K AK ++++S K++G +E
Sbjct: 73 LATPVPAAPKKEEAPPPEEPKKEEKPKEKSKKSAKSKKSSKSKKDKKDGEEE 124
>U97014-2|AAB52426.2| 151|Caenorhabditis elegans Histone h1 like
protein 8 protein.
Length = 151
Score = 31.5 bits (68), Expect = 0.77
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 146 VTSTEPKESPVKKSPAKKVEAAESNGKENGTDEA 247
+T+ +P+ SP+KKSP++ + + K G +E+
Sbjct: 111 LTTQDPQNSPLKKSPSRAAAGGKGDSKAQGDNES 144
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
F35A5.1 protein.
Length = 1274
Score = 31.5 bits (68), Expect = 0.77
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 98 TMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAA 211
T D + KK + +T+PK+ +K SPAKK E A
Sbjct: 1105 TSKDPKLSKKAPVEKPKPTTDPKDDKLKPSPAKKPEKA 1142
>Z78015-4|CAB01436.2| 149|Caenorhabditis elegans Hypothetical
protein R02D5.7 protein.
Length = 149
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 92 LATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESN-GKENGTDE 244
LAT AA K+E P E E K K AK ++++S K++G DE
Sbjct: 73 LATPGPAAPKKEEAPPPEKPKKEEKPKEKSKKSAKSKKSSKSKKDKKDGEDE 124
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2
Query: 122 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPE 253
KKE P+E + K KS K + + NG EN D P+
Sbjct: 93 KKEEKPKEKSKKSAKSKKSSKSKKDKKDGEDENGYENCQDMTPD 136
>Z92803-7|CAB07244.1| 445|Caenorhabditis elegans Hypothetical
protein K01G5.5 protein.
Length = 445
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +2
Query: 122 KKEVAPEEVTSTEPKESPVKKS-PAKKVEAAESN 220
KKEV EE E +E+P KKS +KK E+++S+
Sbjct: 410 KKEVKKEETPDEEEEEAPKKKSKKSKKQESSDSD 443
>U40933-6|AAQ23123.1| 199|Caenorhabditis elegans C.elegans homeobox
protein 19,isoform b protein.
Length = 199
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +1
Query: 250 RSSPAENG-DAEESNDASENGDATEKKE 330
+S+P E G D EE ND+ +NG+ E++E
Sbjct: 12 KSNPVEEGNDFEEENDSEKNGEEDEEEE 39
>U41534-4|AAB47596.1| 323|Caenorhabditis elegans Hypothetical
protein C16A3.6 protein.
Length = 323
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 107 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEVRL 262
D+ D +E E + EP + VKK P KK ++GK+ + V +
Sbjct: 258 DSDEDDEEGGDEPMEIEEPPKKKVKKEPKKKTGKKAADGKKKKLKKRAHVEI 309
>U41011-9|AAA82292.1| 359|Caenorhabditis elegans Hypothetical
protein D2024.1 protein.
Length = 359
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -3
Query: 301 QMHRCFLQHHHFQQANF-WGFIGTILFAITFCSFNF 197
QMH C HH + ANF WG +L + F +F
Sbjct: 138 QMHDCGFLHHDLKPANFVWGQSDEVLTSRVFYLIDF 173
>AF016684-4|AAB66208.1| 159|Caenorhabditis elegans Hypothetical
protein F45C12.9 protein.
Length = 159
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 37 TRVLNFYSLFKLFHFFNLPCNNGR 108
T +LN+Y L LF+F+ + C +G+
Sbjct: 60 TCILNYYYLCNLFNFYGIVCEDGQ 83
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 256 SPAENGD-AEESNDASENGDATEKKETGVKRKS 351
SP + D +++S+DASEN ++E E K+K+
Sbjct: 47 SPESSSDQSDDSDDASENSSSSEPDEPAPKKKN 79
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 110 AAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDE 244
A+ KKE +PE+ E K SP +KSP K E +S K+ + E
Sbjct: 1702 ASPTKKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKSPTKKEKSPE 1745
>AF003383-3|ABO16467.1| 438|Caenorhabditis elegans Cyclophylin
protein 17 protein.
Length = 438
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = +2
Query: 98 TMADAAVDKKEVAPEE---VTSTEPKESPVKK 184
TMA V ++EV PEE +T+T K PVKK
Sbjct: 232 TMAPEEVPEEEVIPEEEEEITTTTRKTRPVKK 263
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 110 AAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDE 244
A+ KKE +PE+ E K SP +KSP K E +S K+ + E
Sbjct: 1702 ASPTKKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKSPTKKEKSPE 1745
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 110 AAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDE 244
A+ KKE +PE+ E K SP +KSP K E +S K+ + E
Sbjct: 1702 ASPTKKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKSPTKKEKSPE 1745
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 110 AAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDE 244
A+ KKE +PE+ E K SP +KSP K E +S K+ + E
Sbjct: 1702 ASPTKKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKSPTKKEKSPE 1745
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 11/59 (18%)
Frame = +2
Query: 110 AAVDKKEVAPEEVTSTEPKESPVK--KSPAK-------KVEAAESNG--KENGTDEAPE 253
A V+ +E + E E +ESP+K K+P K KVE+ ES+G +E +E+P+
Sbjct: 459 AKVESEEPSDNEEEEEEVEESPIKKDKTPRKYSRKSAAKVESTESSGNEEEEEVEESPK 517
>Z78012-5|CAB01415.1| 590|Caenorhabditis elegans Hypothetical
protein C52E4.5 protein.
Length = 590
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 137 PEEVTSTEPKESPVKKSPAKKVEAAE 214
P E TSTEP+E+ V K+P + E E
Sbjct: 96 PGEKTSTEPEETGVGKAPIQTSEGLE 121
>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
protein B0457.1b protein.
Length = 1012
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 327 FLFCGITVLRCIVAFFSITIFSRRTSGASSV--PFSLPLLSAASTFLAGDFLTGDS 166
++ C I+++ ++ FF+ IFSR + L L A TFLAG T DS
Sbjct: 554 YVGCIISIICLLLTFFAYLIFSRNGGDRVFIHENLCLSLAIAEITFLAGITRTEDS 609
>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
protein B0457.1a protein.
Length = 1014
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 327 FLFCGITVLRCIVAFFSITIFSRRTSGASSV--PFSLPLLSAASTFLAGDFLTGDS 166
++ C I+++ ++ FF+ IFSR + L L A TFLAG T DS
Sbjct: 556 YVGCIISIICLLLTFFAYLIFSRNGGDRVFIHENLCLSLAIAEITFLAGITRTEDS 611
>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
protein LAT-1B protein.
Length = 1012
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 327 FLFCGITVLRCIVAFFSITIFSRRTSGASSV--PFSLPLLSAASTFLAGDFLTGDS 166
++ C I+++ ++ FF+ IFSR + L L A TFLAG T DS
Sbjct: 554 YVGCIISIICLLLTFFAYLIFSRNGGDRVFIHENLCLSLAIAEITFLAGITRTEDS 609
>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
protein LAT-1A protein.
Length = 1014
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 327 FLFCGITVLRCIVAFFSITIFSRRTSGASSV--PFSLPLLSAASTFLAGDFLTGDS 166
++ C I+++ ++ FF+ IFSR + L L A TFLAG T DS
Sbjct: 556 YVGCIISIICLLLTFFAYLIFSRNGGDRVFIHENLCLSLAIAEITFLAGITRTEDS 611
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 119 DKKEVAPEEVTSTEPKES--PVKKSPAKKVEAAESNGKENGTDEAP 250
++KE +++ +E P KK PAKK +A+ S ++ +E+P
Sbjct: 30 ERKEKRAQKLKEKREREGKPPPKKRPAKKRKASSSEEDDDDEEESP 75
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +2
Query: 125 KEVAPEEVTSTEPKESP---VKKSPAKKVEAAESNGK 226
K+ P EV + P SP + KSP +V A E NGK
Sbjct: 119 KKNIPVEVVNVNPDRSPNWYLPKSPIGRVPALEINGK 155
>AF016448-8|AAW30665.1| 536|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform c protein.
Length = 536
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 107 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKEN 232
D + K+ P E T+ + K+ K+SP KK +S GKEN
Sbjct: 112 DPETETKKKDPSEQTNGQVKKKSDKQSPKKK---EKSEGKEN 150
>AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform a protein.
Length = 1085
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +2
Query: 107 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKEN 232
D + K+ P E T+ + K+ K+SP KK +S GKEN
Sbjct: 112 DPETETKKKDPSEQTNGQVKKKSDKQSPKKK---EKSEGKEN 150
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 119 DKKEVAPEEVTSTEPKES--PVKKSPAKKVEAAESNGKENGTDEAP 250
++KE +++ +E P KK PAKK +A+ S ++ +E+P
Sbjct: 30 ERKEKRAQKLKEKREREGKPPPKKRPAKKRKASSSEEDDDDEEESP 75
>Z68880-9|CAA93099.1| 255|Caenorhabditis elegans Hypothetical
protein K08F4.9 protein.
Length = 255
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 225 LPLLSAASTFLAGDFLTGDSFGSVEVTSSGATSFLSTAAS 106
LPLL A++ ++GD LT D V + S A+ L+ S
Sbjct: 127 LPLLQKAASHVSGDSLTPDRAAIVNIGSDCASQALNLRGS 166
>Z68879-12|CAA93091.1| 255|Caenorhabditis elegans Hypothetical
protein K08F4.9 protein.
Length = 255
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 225 LPLLSAASTFLAGDFLTGDSFGSVEVTSSGATSFLSTAAS 106
LPLL A++ ++GD LT D V + S A+ L+ S
Sbjct: 127 LPLLQKAASHVSGDSLTPDRAAIVNIGSDCASQALNLRGS 166
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +2
Query: 119 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDE 244
++++ EEV T PK+S KSP KK + AE++ +E+ +E
Sbjct: 276 EEEDEVEEEVVKT-PKKSKSSKSP-KKSKRAETSDEEDEDEE 315
>U10401-6|AAA19061.1| 697|Caenorhabditis elegans Hmg protein 4
protein.
Length = 697
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +2
Query: 113 AVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPE 253
A+ K+ ++ + + E + KK+ A K E+ ESN +G+DE+ +
Sbjct: 650 AISKEYISDSDDSDDEEPKKKEKKA-APKEESEESNNGSDGSDESDD 695
>AF078785-7|AAC27086.2| 295|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 2 protein.
Length = 295
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 292 RCFLQHHHFQQANFWGFIGTILFAITFCSFNFLSWRLL 179
RC L + +F N+W ++LFA+ F LS RLL
Sbjct: 168 RCSLDNCYF---NYWTTDRSVLFALNFAFSGLLSTRLL 202
>AF002198-6|AAF99938.1| 295|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 1 protein.
Length = 295
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 292 RCFLQHHHFQQANFWGFIGTILFAITFCSFNFLSWRLL 179
RC L + +F N+W ++LFA+ F LS RLL
Sbjct: 168 RCSLDNCYF---NYWTTDRSVLFALNFAFSGLLSTRLL 202
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 493 MPIRVHSHPHIPLLQMYYTHTDSLIL*RVELF 588
MP +HP++P+ +T+ D ++ R ELF
Sbjct: 271 MPYNQTNHPNVPIAVRVFTYEDRKMVMRSELF 302
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,066,129
Number of Sequences: 27780
Number of extensions: 341093
Number of successful extensions: 1508
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1485
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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