Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120477.Seq
(422 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0GYC3 Cluster: Putative uncharacterized protein; n=2; ... 108 4e-23
UniRef50_P41658 Cluster: Late expression factor 5; n=13; Nucleop... 101 5e-21
UniRef50_Q77K58 Cluster: Lef5; n=4; Nucleopolyhedrovirus|Rep: Le... 60 2e-08
UniRef50_O10344 Cluster: Late expression factor 5; n=8; Nucleopo... 52 6e-06
UniRef50_Q0IL15 Cluster: Lef-5; n=5; Nucleopolyhedrovirus|Rep: L... 47 2e-04
UniRef50_P41727 Cluster: Late expression factor 5 homolog; n=10;... 43 0.002
UniRef50_P24649 Cluster: DNA-binding protein; n=6; Nucleopolyhed... 41 0.012
UniRef50_UPI0000F1D641 Cluster: PREDICTED: similar to tenascin-R... 35 0.60
UniRef50_Q38X97 Cluster: DNA primase G; n=1; Lactobacillus sakei... 33 2.4
UniRef50_Q9SY59 Cluster: F14N23.5; n=8; Magnoliophyta|Rep: F14N2... 32 4.2
UniRef50_Q5UPT1 Cluster: Putative transcription initiation facto... 32 5.6
UniRef50_Q73T79 Cluster: Putative uncharacterized protein; n=2; ... 31 7.4
UniRef50_A7IDZ7 Cluster: Putative uncharacterized protein; n=1; ... 31 9.7
UniRef50_Q4E351 Cluster: Putative uncharacterized protein; n=3; ... 31 9.7
>UniRef50_Q0GYC3 Cluster: Putative uncharacterized protein; n=2;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Plutella xylostella multiple
nucleopolyhedrovirus
Length = 74
Score = 108 bits (260), Expect = 4e-23
Identities = 47/61 (77%), Positives = 48/61 (78%)
Frame = -1
Query: 185 MNGSWIFCMCEVYPGGVCNPSFCVCV*YRLKNGAGVSNHMWHRLKNDDGDDKPCLNCVIY 6
MNGSWIFCMC VYPGGVCNPSFC C VSNHMW+RLKN DGDDKPCLNCVIY
Sbjct: 1 MNGSWIFCMCGVYPGGVCNPSFCAC----------VSNHMWYRLKNGDGDDKPCLNCVIY 50
Query: 5 V 3
V
Sbjct: 51 V 51
>UniRef50_P41658 Cluster: Late expression factor 5; n=13;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 265
Score = 101 bits (243), Expect = 5e-21
Identities = 48/49 (97%), Positives = 49/49 (100%)
Frame = -1
Query: 401 ILNDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFL 255
ILNDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASF+
Sbjct: 206 ILNDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFI 254
>UniRef50_Q77K58 Cluster: Lef5; n=4; Nucleopolyhedrovirus|Rep: Lef5
- Helicoverpa armigera NPV
Length = 315
Score = 60.1 bits (139), Expect = 2e-08
Identities = 28/52 (53%), Positives = 40/52 (76%), Gaps = 3/52 (5%)
Frame = -1
Query: 401 ILNDKVIY---LQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFL 255
IL D++I + +S K KL+ ++G+SL++C+H FVTVE QTRAGDEI SF+
Sbjct: 249 ILTDELILFKPINSSLKYKLYSINGMSLRACQHSFVTVEKQTRAGDEIVSFI 300
>UniRef50_O10344 Cluster: Late expression factor 5; n=8;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 263
Score = 51.6 bits (118), Expect = 6e-06
Identities = 27/54 (50%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Frame = -1
Query: 401 ILNDKVIYLQNSN-----KNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFL 255
+L+D+VIYL N N + L SG SL C H + TVE QTRAGDE+ SF+
Sbjct: 200 LLSDRVIYLHNKNDVLDERTLLHGPSGTSLAPCLHRYATVERQTRAGDEMVSFI 253
>UniRef50_Q0IL15 Cluster: Lef-5; n=5; Nucleopolyhedrovirus|Rep:
Lef-5 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 302
Score = 46.8 bits (106), Expect = 2e-04
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = -1
Query: 368 SNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFL 255
++ ++L +SG+SL C+H+FV VE Q RAGDE SF+
Sbjct: 251 ADADRLHPMSGMSLNLCKHEFVVVERQLRAGDEAVSFI 288
>UniRef50_P41727 Cluster: Late expression factor 5 homolog; n=10;
Granulovirus|Rep: Late expression factor 5 homolog -
Cryptophlebia leucotreta granulosis virus (ClGV)
(Cryptophlebialeucotreta granulovirus)
Length = 240
Score = 43.2 bits (97), Expect = 0.002
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = -1
Query: 368 SNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLATVGCVEC 231
S+++ L L+G ++ SC HD+V E Q RAGDE+ SF+ C +C
Sbjct: 194 SSQSSLSNLNGYTIASCVHDYVIEEHQLRAGDEMVSFIKF--CKKC 237
>UniRef50_P24649 Cluster: DNA-binding protein; n=6;
Nucleopolyhedrovirus|Rep: DNA-binding protein - Bombyx
mori nuclear polyhedrosis virus (BmNPV)
Length = 65
Score = 40.7 bits (91), Expect = 0.012
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2
Query: 26 MVYRRRRRSSTGATYGLT 79
MVYRRRRRSSTGATYGLT
Sbjct: 1 MVYRRRRRSSTGATYGLT 18
>UniRef50_UPI0000F1D641 Cluster: PREDICTED: similar to tenascin-R;
n=1; Danio rerio|Rep: PREDICTED: similar to tenascin-R -
Danio rerio
Length = 618
Score = 35.1 bits (77), Expect = 0.60
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = -1
Query: 224 VNSSVFCNFGGLSMNGSWIFCMCEVYPGGVCNPSFCVC 111
VN S C G L + S IFC GVC FCVC
Sbjct: 272 VNGSCQCRSGFLGEDCSLIFCANNCSQRGVCKEGFCVC 309
>UniRef50_Q38X97 Cluster: DNA primase G; n=1; Lactobacillus sakei
subsp. sakei 23K|Rep: DNA primase G - Lactobacillus
sakei subsp. sakei (strain 23K)
Length = 627
Score = 33.1 bits (72), Expect = 2.4
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 93 LQPVSHADAEARVTDAARVDLAHTEDPGAVH*QAAEVTEHATINSQ 230
L+ +S +A +V D A V LA + P AVH +++EVT+ + Q
Sbjct: 77 LEQISFPEALTKVADFAGVTLADSYKPTAVHRESSEVTQFKQLYQQ 122
>UniRef50_Q9SY59 Cluster: F14N23.5; n=8; Magnoliophyta|Rep: F14N23.5
- Arabidopsis thaliana (Mouse-ear cress)
Length = 1188
Score = 32.3 bits (70), Expect = 4.2
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -1
Query: 338 GLSLKSCRHDFVTV-ESQTRAGDEIASFLATVGCVECLAVNSSVFCNFGGLSMNGSWIFC 162
G CRH + D F T+ C C + ++V C+ GG S NGS ++C
Sbjct: 754 GAPRTDCRHTCAALCHPSAPCPDLRCEFSVTITC-SCGRITATVPCDAGGRSANGSNVYC 812
>UniRef50_Q5UPT1 Cluster: Putative transcription initiation factor
IIB-like protein; n=1; Acanthamoeba polyphaga
mimivirus|Rep: Putative transcription initiation factor
IIB-like protein - Mimivirus
Length = 461
Score = 31.9 bits (69), Expect = 5.6
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -1
Query: 401 ILNDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTR 282
ILN K YL+N +K+K+ EL ++K DF++V S +
Sbjct: 12 ILNTK--YLENGSKHKIIELPKTNIKKLIKDFLSVNSNKK 49
>UniRef50_Q73T79 Cluster: Putative uncharacterized protein; n=2;
Mycobacterium avium|Rep: Putative uncharacterized
protein - Mycobacterium paratuberculosis
Length = 201
Score = 31.5 bits (68), Expect = 7.4
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 117 AEARVTDAARV--DLAHTEDPGAVH*QAAEVTEH-ATINSQTFHTSDSSK 257
A TD AR+ D TEDPGA AA+VT H A + + +D SK
Sbjct: 37 AATLTTDEARLLDDAGFTEDPGAYAEIAADVTAHMARLYGTAYSAADVSK 86
>UniRef50_A7IDZ7 Cluster: Putative uncharacterized protein; n=1;
Xanthobacter autotrophicus Py2|Rep: Putative
uncharacterized protein - Xanthobacter sp. (strain Py2)
Length = 469
Score = 31.1 bits (67), Expect = 9.7
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +1
Query: 28 GLSSPSSFFNRCHIWFDTPAPFFSRYHT---QTQKLGLQTP 141
GL + SF +C+IWFD AP R + T +LG++ P
Sbjct: 389 GLVADWSFGGKCNIWFDYEAPDAPRLYKANYSTDELGVRDP 429
>UniRef50_Q4E351 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma cruzi|Rep: Putative uncharacterized protein -
Trypanosoma cruzi
Length = 1710
Score = 31.1 bits (67), Expect = 9.7
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +1
Query: 37 SPSSFFNRCHIWFDTPAPFFSRYHTQTQKLGLQTPPG*TSHIQKIQEPFIDKPPKLQNTL 216
+PSSF + IW TP R L + SHI ++ P I + + +
Sbjct: 1011 TPSSFSSPSSIWTSTPFSETLRVAMGVMALASNSQQALLSHISRVFAPMITREDVMARWM 1070
Query: 217 LLTARHSTHP 246
L R+ HP
Sbjct: 1071 LDKFRNLPHP 1080
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 369,559,917
Number of Sequences: 1657284
Number of extensions: 6795901
Number of successful extensions: 19551
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19546
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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