Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120477.Seq
         (422 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070709-1|AAL48180.1|  652|Drosophila melanogaster SD02261p pro...    29   1.9  
AE014296-3203|AAF49118.1|  652|Drosophila melanogaster CG8743-PA...    29   1.9  
AE014134-301|AAX52653.1|  386|Drosophila melanogaster CG31931-PA...    29   1.9  

>AY070709-1|AAL48180.1|  652|Drosophila melanogaster SD02261p
           protein.
          Length = 652

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -1

Query: 263 SFLATVGCVECLAVNSSVFCNFGGLSMNGSWIFCMCEVY 147
           S   T  C+  L     +F  F  LS   +W++  C++Y
Sbjct: 511 SLATTSECLFALINGDDMFATFATLSSKATWLWWFCQIY 549


>AE014296-3203|AAF49118.1|  652|Drosophila melanogaster CG8743-PA
           protein.
          Length = 652

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -1

Query: 263 SFLATVGCVECLAVNSSVFCNFGGLSMNGSWIFCMCEVY 147
           S   T  C+  L     +F  F  LS   +W++  C++Y
Sbjct: 511 SLATTSECLFALINGDDMFATFATLSSKATWLWWFCQIY 549


>AE014134-301|AAX52653.1|  386|Drosophila melanogaster CG31931-PA
           protein.
          Length = 386

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 253 LLSDVWNVWLLIVACSVTSAACQ*TA 176
           LL ++W+ WL I AC +T  A   TA
Sbjct: 292 LLINIWDFWLCIAACDLTEKAGDETA 317


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,996,850
Number of Sequences: 53049
Number of extensions: 334982
Number of successful extensions: 850
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1292733852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)