Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120477.Seq
         (422 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99279-3|CAB16495.1|  298|Caenorhabditis elegans Hypothetical pr...    30   0.79 
U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical p...    29   1.0  
AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical ...    29   1.4  
U42436-9|AAF99893.1|  109|Caenorhabditis elegans Hypothetical pr...    27   4.2  
AF016683-8|AAM97998.1|  480|Caenorhabditis elegans Hypothetical ...    27   5.5  
AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical ...    27   7.3  
AF125952-3|AAD14699.1|  475|Caenorhabditis elegans Hypothetical ...    27   7.3  
AC006722-9|ABP57813.1|  475|Caenorhabditis elegans Hypothetical ...    27   7.3  
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr...    26   9.7  
Z81076-3|CAB03052.1|  394|Caenorhabditis elegans Hypothetical pr...    26   9.7  
Z70267-1|CAA94211.1|  307|Caenorhabditis elegans Hypothetical pr...    26   9.7  
U49955-1|AAA93430.1|  481|Caenorhabditis elegans Hypothetical pr...    26   9.7  
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein...    26   9.7  
AF039053-16|AAC25869.1|  497|Caenorhabditis elegans Cytochrome p...    26   9.7  

>Z99279-3|CAB16495.1|  298|Caenorhabditis elegans Hypothetical
           protein Y57G11A.3 protein.
          Length = 298

 Score = 29.9 bits (64), Expect = 0.79
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +3

Query: 150 DLAHTEDPGAVH*QAAEVTEHATINSQTFHTSDSSKERSDFVACPRLAFD 299
           ++AHT DP     Q  E  EHA  + + F  S   K+    V C  L+ D
Sbjct: 251 EIAHTMDP-----QNTEEDEHAASDEEEFAVSSKPKQLQGVVKCEFLSLD 295


>U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical
           protein B0222.9 protein.
          Length = 1217

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 200 FGGLSMNGSWIFCMCEVYPGGVCNPSF 120
           FGG   N SWI CMC +    +  P++
Sbjct: 708 FGGKVNNASWIACMCAIVAKKLNRPTY 734


>AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical
           protein F15E6.6 protein.
          Length = 1228

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 200 FGGLSMNGSWIFCMCEVYPGGVCNPSFCV 114
           FGG   N SWI C+C V    +  P++ V
Sbjct: 740 FGGKLNNASWIACICSVVAKKLNRPTYGV 768


>U42436-9|AAF99893.1|  109|Caenorhabditis elegans Hypothetical
           protein C49H3.3 protein.
          Length = 109

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 150 DLAHTEDPGAVH*QAAEVTEHATINSQTFHTSDSS 254
           D   T+  G  + +  EVT  ATIN++T    D S
Sbjct: 43  DAEKTKTDGTANEEKMEVTSQATINTKTLKKKDGS 77


>AF016683-8|AAM97998.1|  480|Caenorhabditis elegans Hypothetical
           protein K09F6.10 protein.
          Length = 480

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -3

Query: 321 LQTRFCNSRKPNEGRRRNRFVPCYCRMCGMSGC 223
           + T FC       GRR  +     CR CG++ C
Sbjct: 328 VNTGFCFKCNQYSGRRHYQTCGAKCRRCGVTNC 360


>AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical
           protein Y39A1C.2 protein.
          Length = 1066

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = -1

Query: 377 LQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLATVGCVECLAVNSSVFCNF 198
           ++NS +NK  ++       CRH  ++++S ++    +A+FL      E  ++ +S+F   
Sbjct: 83  IENSRENKDIQML---CNICRHLIISIDSPSKEISFVAAFLNKDTIKEATSLITSIFSQI 139

Query: 197 GGL--SMNG 177
             +  S+NG
Sbjct: 140 PQILCSING 148


>AF125952-3|AAD14699.1|  475|Caenorhabditis elegans Hypothetical
           protein C01B4.7 protein.
          Length = 475

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -1

Query: 269 IASFLATVGCVECLAVNSSVFCNFGGLSMNGSWIFCMCEVYPGGV 135
           + S L  + CV+CLA+     C+F  +S      +C+  + P GV
Sbjct: 379 VTSGLIIMACVKCLAMRCQQHCHF-AVSAISFLSYCVQFISPLGV 422


>AC006722-9|ABP57813.1|  475|Caenorhabditis elegans Hypothetical
           protein Y19D10A.4 protein.
          Length = 475

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -1

Query: 269 IASFLATVGCVECLAVNSSVFCNFGGLSMNGSWIFCMCEVYPGGV 135
           + S L  + CV+CLA+     C+F  +S      +C+  + P GV
Sbjct: 379 VTSGLIIMACVKCLAMRCQQHCHF-AVSAISFLSYCVQFISPLGV 422


>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical
           protein C10C6.1 protein.
          Length = 1565

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 11/48 (22%), Positives = 20/48 (41%)
 Frame = +1

Query: 184 IDKPPKLQNTLLLTARHSTHPTVARNEAISSPALVWLSTVTKSCLQDF 327
           +D+ P + +T  + +  +TH T +   +       W  T    C  DF
Sbjct: 506 LDRDPLIDSTEHVDSSENTHATTSGTTSAKGAGSAWQETNRAPCEDDF 553


>Z81076-3|CAB03052.1|  394|Caenorhabditis elegans Hypothetical
           protein F35C5.3 protein.
          Length = 394

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
 Frame = +3

Query: 96  QPVSHADAEARVTDAARVDLAHTEDPGAVH*QAAEVTEHATINSQTFH-TSDSSKERSD 269
           +P  H D    VTD A    A     G V  Q       AT      H T DS +E++D
Sbjct: 313 EPTGHTDQAETVTDPASQATASATIIGGVD-QTGSTNLEATTEQICKHPTKDSEEEKTD 370


>Z70267-1|CAA94211.1|  307|Caenorhabditis elegans Hypothetical
           protein K04C1.1 protein.
          Length = 307

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = +1

Query: 31  LSSPSSFFNRCHIWFDTPAPFFSRYHTQTQKL 126
           L + S FF R   W D   PF S   T TQ L
Sbjct: 234 LKNSSEFFERLVDWIDLLVPFASDALTLTQPL 265


>U49955-1|AAA93430.1|  481|Caenorhabditis elegans Hypothetical
           protein C27D9.1 protein.
          Length = 481

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -1

Query: 317 RHDFVTVESQTRAGDEIAS-FLATVGCVECLAVNSSVFCN 201
           R  F  VE   +AGDEIA+ F  ++G  E   ++++ F N
Sbjct: 310 RDHFERVEVDMQAGDEIATCFAESMGMFEQSGMSATAFQN 349


>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
           protein.
          Length = 1565

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 11/48 (22%), Positives = 20/48 (41%)
 Frame = +1

Query: 184 IDKPPKLQNTLLLTARHSTHPTVARNEAISSPALVWLSTVTKSCLQDF 327
           +D+ P + +T  + +  +TH T +   +       W  T    C  DF
Sbjct: 506 LDRDPLIDSTEHVDSSENTHATTSGTTSAKGAGSAWQETNRAPCEDDF 553


>AF039053-16|AAC25869.1|  497|Caenorhabditis elegans Cytochrome p450
           family protein 33C1 protein.
          Length = 497

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 16  QFKHGLSSPSSFFNRCHIWFDTPAPFFSR 102
           + KH + SP+  F + HI+     P F++
Sbjct: 195 ELKHIIDSPAEIFGKLHIFLAMNIPIFAK 223


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,759,160
Number of Sequences: 27780
Number of extensions: 172305
Number of successful extensions: 505
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)