Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120475.Seq
         (862 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.44 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   7.2  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   7.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 553  NDSSYLRSFRIGNNPTDRRRTAGHV 479
            NDS+  +  R+ NNP+ RRR   HV
Sbjct: 1904 NDSAGDKYSRLVNNPSARRRFIAHV 1928



 Score = 21.8 bits (44), Expect = 7.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 553  NDSSYLRSFRIGNNPTDRRRTAGHV 479
            NDS   +  R+ NNP  R R   HV
Sbjct: 1479 NDSQGDKYSRLVNNPAARARFIKHV 1503


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 385 IGVVLNVIYLVYIWLSGDENVNFVLSMLK 471
           I +VLN++  V +WLS   NVN +   LK
Sbjct: 133 IKLVLNILSDVTLWLS---NVNSLTLTLK 158


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 385 IGVVLNVIYLVYIWLSGDENVNFVLSMLK 471
           I +VLN++  V +WLS   NVN +   LK
Sbjct: 59  IKLVLNILSDVTLWLS---NVNSLTLTLK 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,711
Number of Sequences: 336
Number of extensions: 4161
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)