Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120475.Seq
         (862 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC115380-1|AAI15381.1|  706|Homo sapiens FBXL10 protein protein.       32   3.1  
BC115379-1|AAI15380.1|  559|Homo sapiens FBXL10 protein protein.       32   3.1  
AJ459424-1|CAD30700.1| 1336|Homo sapiens JEMMA protein protein.        32   3.1  
AB031230-1|BAA97672.1|  827|Homo sapiens protein containing CXXC...    32   3.1  
AL021808-2|CAB36861.1|  971|Homo sapiens POM121 membrane glycopr...    31   5.4  
U58856-1|AAC51365.1|  401|Homo sapiens unknown protein.                30   9.4  

>BC115380-1|AAI15381.1|  706|Homo sapiens FBXL10 protein protein.
          Length = 706

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/54 (33%), Positives = 21/54 (38%)
 Frame = -2

Query: 222 ENRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGVSCRPAERCGRAASCRSCEFC 61
           +NR V  P  +    S V+          RRR   CR  E C R   C  C FC
Sbjct: 578 KNRAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLR-TECGECHFC 630


>BC115379-1|AAI15380.1|  559|Homo sapiens FBXL10 protein protein.
          Length = 559

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/54 (33%), Positives = 21/54 (38%)
 Frame = -2

Query: 222 ENRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGVSCRPAERCGRAASCRSCEFC 61
           +NR V  P  +    S V+          RRR   CR  E C R   C  C FC
Sbjct: 461 KNRAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLR-TECGECHFC 513


>AJ459424-1|CAD30700.1| 1336|Homo sapiens JEMMA protein protein.
          Length = 1336

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/54 (33%), Positives = 21/54 (38%)
 Frame = -2

Query: 222 ENRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGVSCRPAERCGRAASCRSCEFC 61
           +NR V  P  +    S V+          RRR   CR  E C R   C  C FC
Sbjct: 578 KNRAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLR-TECGECHFC 630


>AB031230-1|BAA97672.1|  827|Homo sapiens protein containing CXXC
           domain 2 protein.
          Length = 827

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/54 (33%), Positives = 21/54 (38%)
 Frame = -2

Query: 222 ENRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGVSCRPAERCGRAASCRSCEFC 61
           +NR V  P  +    S V+          RRR   CR  E C R   C  C FC
Sbjct: 99  KNRAVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLR-TECGECHFC 151


>AL021808-2|CAB36861.1|  971|Homo sapiens POM121 membrane
           glycoprotein-like 2 (rat) protein.
          Length = 971

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = +2

Query: 20  RADLPERFAKERIQQNSHERHDAARPHRSAGRQLTPRRRPLKAR 151
           R DLPER  K R  Q  H+ H     HR+      PR RP++ R
Sbjct: 19  RTDLPERPTKRRPPQPLHQVHRVQFVHRA---HPAPRYRPVRRR 59


>U58856-1|AAC51365.1|  401|Homo sapiens unknown protein.
          Length = 401

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -1

Query: 238 SHMADGKQTG*VSDTAQRTPQRCAIRSTDPSFKRAAARRQLPAGRTV 98
           +HM DGK     S + +   Q C IR+  P   RA     +P+GR+V
Sbjct: 311 NHMLDGKGNE-TSFSPEPPAQACFIRAPGPLLCRARGASPVPSGRSV 356


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,644,117
Number of Sequences: 237096
Number of extensions: 2334559
Number of successful extensions: 5612
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5607
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)