Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120475.Seq
         (862 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2874|AAF48973.1| 1039|Drosophila melanogaster CG14217-P...    30   3.6  
AE014298-2873|AAN09504.1| 1039|Drosophila melanogaster CG14217-P...    30   3.6  
AB277547-1|BAF51959.1| 1039|Drosophila melanogaster serine/threo...    30   3.6  
AY089241-1|AAL89979.1|  783|Drosophila melanogaster AT02886p pro...    29   8.2  
AE014297-1239|AAF54588.2|  783|Drosophila melanogaster CG4706-PA...    29   8.2  

>AE014298-2874|AAF48973.1| 1039|Drosophila melanogaster CG14217-PE,
           isoform E protein.
          Length = 1039

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = -2

Query: 276 DWNAQYCKRVTLCLTWLTENRPVKCPTPRNAHRSVVRSDRQTLALRGRRR 127
           DW+  +C  V LCL  +   RP       +A+ +  RSD   L L  R +
Sbjct: 248 DWSDAFCSFVELCLKKMPAERPSSAKLLTHAYVTRPRSDTVLLELIARTK 297


>AE014298-2873|AAN09504.1| 1039|Drosophila melanogaster CG14217-PD,
           isoform D protein.
          Length = 1039

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = -2

Query: 276 DWNAQYCKRVTLCLTWLTENRPVKCPTPRNAHRSVVRSDRQTLALRGRRR 127
           DW+  +C  V LCL  +   RP       +A+ +  RSD   L L  R +
Sbjct: 248 DWSDAFCSFVELCLKKMPAERPSSAKLLTHAYVTRPRSDTVLLELIARTK 297


>AB277547-1|BAF51959.1| 1039|Drosophila melanogaster
           serine/threonine protein kinaseTAO1 alpha protein.
          Length = 1039

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = -2

Query: 276 DWNAQYCKRVTLCLTWLTENRPVKCPTPRNAHRSVVRSDRQTLALRGRRR 127
           DW+  +C  V LCL  +   RP       +A+ +  RSD   L L  R +
Sbjct: 248 DWSDAFCSFVELCLKKMPAERPSSAKLLTHAYVTRPRSDTVLLELIARTK 297


>AY089241-1|AAL89979.1|  783|Drosophila melanogaster AT02886p
           protein.
          Length = 783

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -3

Query: 644 TNIPITVYLQAYQYLVCNNGKTEAPLTKTNKRFVLS*ELPDRQQSNGPSSHRRSRP 477
           T IP+  Y +  + L C  G+   PLT + K      + PD Q+     S+ R RP
Sbjct: 37  TGIPLP-YKKLRENLDCIKGRLGGPLTLSEKVLYSHLDQPDSQEIERGKSYLRLRP 91


>AE014297-1239|AAF54588.2|  783|Drosophila melanogaster CG4706-PA
           protein.
          Length = 783

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -3

Query: 644 TNIPITVYLQAYQYLVCNNGKTEAPLTKTNKRFVLS*ELPDRQQSNGPSSHRRSRP 477
           T IP+  Y +  + L C  G+   PLT + K      + PD Q+     S+ R RP
Sbjct: 37  TGIPLP-YKKLRENLDCIKGRLGGPLTLSEKVLYSHLDQPDSQEIERGKSYLRLRP 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,856,274
Number of Sequences: 53049
Number of extensions: 777158
Number of successful extensions: 2095
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2092
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)