BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120475.Seq
(862 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 24 1.6
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 22 6.3
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 6.3
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 22 8.4
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 22 8.4
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 8.4
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 22 8.4
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 24.2 bits (50), Expect = 1.6
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 204 CPTPRNAHRSVVRSDRQTLALRGRRRGVSC 115
CPTPR+ H V +R R RR SC
Sbjct: 382 CPTPRSTHLKVSGINRVGSTRRPSRRN-SC 410
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 22.2 bits (45), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 219 NRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGV 121
NRP+ P PR H +R + ++ A G R V
Sbjct: 73 NRPIYIPQPRPPHPR-LRREAESEAEPGNNRPV 104
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.2 bits (45), Expect = 6.3
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 460 SMLKLAGRDRRCDDGPLDCCLSGSS*DKTNRLFVFVR 570
S L+ + + + P +C SGS + LF F+R
Sbjct: 300 SALQEMNKSKSITEPPKNCADSGSIWETGKNLFEFIR 336
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 21.8 bits (44), Expect = 8.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 219 NRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGV 121
NRPV P PR H +R + + A G R V
Sbjct: 44 NRPVYIPQPRPPHPR-LRREAEPEAEPGNNRPV 75
Score = 21.8 bits (44), Expect = 8.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 219 NRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGV 121
NRPV P PR H +R + + A G R V
Sbjct: 72 NRPVYIPQPRPPHPR-LRREAELEAEPGNNRPV 103
Score = 21.8 bits (44), Expect = 8.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 219 NRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGV 121
NRPV P PR H +R + + A G R V
Sbjct: 128 NRPVYIPQPRPPHPR-LRREAELEAEPGNNRPV 159
Score = 21.8 bits (44), Expect = 8.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 219 NRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGV 121
NRPV P PR H +R + + A G R V
Sbjct: 184 NRPVYIPQPRPPHPR-LRREAEPEAEPGNNRPV 215
Score = 21.8 bits (44), Expect = 8.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 219 NRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGV 121
NRPV P PR H +R + + A G R V
Sbjct: 212 NRPVYIPQPRPPHPR-LRREAEPEAEPGNNRPV 243
Score = 21.8 bits (44), Expect = 8.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 219 NRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGV 121
NRPV P PR H +R + + A G R V
Sbjct: 240 NRPVYIPQPRPPHPR-LRREAKPEAKPGNNRPV 271
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 21.8 bits (44), Expect = 8.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 219 NRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGV 121
NRPV P PR H +R + + A G R V
Sbjct: 45 NRPVYIPQPRPPHPR-LRREAEPEAEPGNNRPV 76
Score = 21.8 bits (44), Expect = 8.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 219 NRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGV 121
NRPV P PR H +R + + A G R V
Sbjct: 73 NRPVYIPQPRPPHPR-LRREAEPEAEPGNNRPV 104
Score = 21.8 bits (44), Expect = 8.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 219 NRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGV 121
NRPV P PR H +R + + A G R V
Sbjct: 101 NRPVYIPQPRPPHPR-LRREAEPEAEPGNNRPV 132
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.8 bits (44), Expect = 8.4
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -1
Query: 280 RRLERTVLQTRYAVSHMADGKQTG*VSDTAQRTPQRCAIRSTD 152
RR+ T+L +A+S +++T RTP +C +TD
Sbjct: 301 RRVWLTILLV-WAISAAIGSPIVLGLNNTPDRTPDQCLFYNTD 342
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 21.8 bits (44), Expect = 8.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 219 NRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGV 121
NRPV P PR H +R + + A G R V
Sbjct: 16 NRPVYIPQPRPPHPR-LRREAEPEAEPGNNRPV 47
Score = 21.8 bits (44), Expect = 8.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 219 NRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGV 121
NRPV P PR H +R + + A G R V
Sbjct: 44 NRPVYIPQPRPPHPR-LRREAEPEAEPGNNRPV 75
Score = 21.8 bits (44), Expect = 8.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 219 NRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGV 121
NRPV P PR H +R + + A G R V
Sbjct: 72 NRPVYIPQPRPPHPR-LRREAEPEAEPGNNRPV 103
Score = 21.8 bits (44), Expect = 8.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 219 NRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGV 121
NRPV P PR H +R + + A G R V
Sbjct: 100 NRPVYIPQPRPPHPR-LRREAEPEAEPGNNRPV 131
Score = 21.8 bits (44), Expect = 8.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 219 NRPVKCPTPRNAHRSVVRSDRQTLALRGRRRGV 121
NRPV P PR H +R + + A G R V
Sbjct: 156 NRPVYIPQPRPPHPR-LRREAEPEAEPGNNRPV 187
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,285
Number of Sequences: 438
Number of extensions: 5128
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -