Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120473.Seq
         (835 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   3.0  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       23   3.9  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   3.9  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   3.9  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   5.2  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   5.2  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   5.2  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   6.9  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   6.9  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   6.9  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   6.9  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   6.9  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   9.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.1  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 304 GFNNPSGTFTRHIIK 260
           G ++PS  FTRH+I+
Sbjct: 261 GTSSPSNRFTRHLIQ 275


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 358 RSEQNYTHITVLSLTENFGFNN 293
           R  Q YT    L L + F FN+
Sbjct: 8   RGRQTYTRFQTLELEKEFHFNH 29


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 358 RSEQNYTHITVLSLTENFGFNN 293
           R  Q YT    L L + F FN+
Sbjct: 159 RGRQTYTRFQTLELEKEFHFNH 180


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 358 RSEQNYTHITVLSLTENFGFNN 293
           R  Q YT    L L + F FN+
Sbjct: 218 RGRQTYTRFQTLELEKEFHFNH 239


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 358 RSEQNYTHITVLSLTENFGFN 296
           R+ Q YT    L L + F FN
Sbjct: 185 RTRQTYTRYQTLELEKEFHFN 205


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 358 RSEQNYTHITVLSLTENFGFN 296
           R+ Q YT    L L + F FN
Sbjct: 185 RTRQTYTRYQTLELEKEFHFN 205


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 358 RSEQNYTHITVLSLTENFGFN 296
           R+ Q YT    L L + F FN
Sbjct: 185 RTRQTYTRYQTLELEKEFHFN 205


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 29  LNPKKNINCSSNIIQNL 79
           LN +  +  SSNI+QNL
Sbjct: 116 LNTQPPVTSSSNILQNL 132


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 29  LNPKKNINCSSNIIQNL 79
           LN +  +  SSNI+QNL
Sbjct: 116 LNTQPPVTSSSNILQNL 132


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 358 RSEQNYTHITVLSLTENFGFN 296
           R  Q YT    L L + F FN
Sbjct: 244 RGRQTYTRYQTLELEKEFHFN 264


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 29  LNPKKNINCSSNIIQNL 79
           LN +  +  SSNI+QNL
Sbjct: 116 LNTQPPVTSSSNILQNL 132


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 358 RSEQNYTHITVLSLTENFGFN 296
           R  Q YT    L L + F FN
Sbjct: 246 RGRQTYTRYQTLELEKEFHFN 266


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 189 DQGLIIILDNGRNVAN 236
           D G ++ILDN  ++ N
Sbjct: 62  DDGSLLILDNATDITN 77


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 197 ALIYFRRHFVVAL*LEYTTVKL 132
           A I+F  H +  L L+Y T+ L
Sbjct: 185 AFIFFNMHLLFLLCLDYFTLHL 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,829
Number of Sequences: 336
Number of extensions: 3735
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)