Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120473.Seq
         (835 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004499-1|AAO42663.1|  315|Drosophila melanogaster GH12037p pro...    30   3.4  
AE014296-464|AAN11516.1|  315|Drosophila melanogaster CG1146-PC,...    30   3.4  
AE014296-463|AAN11515.1|  315|Drosophila melanogaster CG1146-PB,...    30   3.4  
AE014296-462|AAF47651.1|  315|Drosophila melanogaster CG1146-PA,...    30   3.4  

>BT004499-1|AAO42663.1|  315|Drosophila melanogaster GH12037p
           protein.
          Length = 315

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +2

Query: 368 KNSVAEQAPGEFKHIELLSALQTPTWQMIRELPESPSKSKGDW 496
           K S+A Q   + +HIE    L    WQ + E P   + S  DW
Sbjct: 157 KTSIASQLSAQLQHIEQTMHL----WQELEEEPSKKASSHNDW 195


>AE014296-464|AAN11516.1|  315|Drosophila melanogaster CG1146-PC,
           isoform C protein.
          Length = 315

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +2

Query: 368 KNSVAEQAPGEFKHIELLSALQTPTWQMIRELPESPSKSKGDW 496
           K S+A Q   + +HIE    L    WQ + E P   + S  DW
Sbjct: 157 KTSIASQLSAQLQHIEQTMHL----WQELEEEPSKKASSHNDW 195


>AE014296-463|AAN11515.1|  315|Drosophila melanogaster CG1146-PB,
           isoform B protein.
          Length = 315

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +2

Query: 368 KNSVAEQAPGEFKHIELLSALQTPTWQMIRELPESPSKSKGDW 496
           K S+A Q   + +HIE    L    WQ + E P   + S  DW
Sbjct: 157 KTSIASQLSAQLQHIEQTMHL----WQELEEEPSKKASSHNDW 195


>AE014296-462|AAF47651.1|  315|Drosophila melanogaster CG1146-PA,
           isoform A protein.
          Length = 315

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +2

Query: 368 KNSVAEQAPGEFKHIELLSALQTPTWQMIRELPESPSKSKGDW 496
           K S+A Q   + +HIE    L    WQ + E P   + S  DW
Sbjct: 157 KTSIASQLSAQLQHIEQTMHL----WQELEEEPSKKASSHNDW 195


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,375,286
Number of Sequences: 53049
Number of extensions: 634704
Number of successful extensions: 1249
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)