Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120471.Seq
(826 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28312| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_14721| Best HMM Match : Dicty_spore_N (HMM E-Value=6.8) 31 1.1
SB_3005| Best HMM Match : Dicty_spore_N (HMM E-Value=6.8) 31 1.1
SB_25877| Best HMM Match : TP1 (HMM E-Value=8.5) 31 1.5
SB_50241| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_6631| Best HMM Match : SOCS_box (HMM E-Value=1.5e-10) 29 3.5
SB_38410| Best HMM Match : 7tm_1 (HMM E-Value=0) 29 4.6
SB_47960| Best HMM Match : Extensin_2 (HMM E-Value=0.54) 29 6.1
SB_48322| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_45954| Best HMM Match : VWA (HMM E-Value=4e-26) 28 8.0
SB_44509| Best HMM Match : EMI (HMM E-Value=4.2) 28 8.0
SB_25738| Best HMM Match : Fer4 (HMM E-Value=1.1) 28 8.0
SB_22629| Best HMM Match : CDC37 (HMM E-Value=3.7) 28 8.0
SB_12493| Best HMM Match : RrnaAD (HMM E-Value=4.6) 28 8.0
SB_57364| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_38222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_13733| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_6135| Best HMM Match : CSD (HMM E-Value=5.4) 28 8.0
>SB_28312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 522 SSDNAAIPASKKRQTAVLTNANLAELKESCEMRDKLYSEFYSLLNETFNNNVAPLL 689
S N A P + A ++E+KE C +++ Y++F+ LL ET N A L
Sbjct: 44 SKGNLACPFKARADNTYELRALMSEMKEKCTGKEE-YTKFFKLL-ETINKETAAKL 97
>SB_14721| Best HMM Match : Dicty_spore_N (HMM E-Value=6.8)
Length = 121
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 522 SSDNAAIPASKKRQTAVLTNANLAELKESCEMRDKLYSEFYSLLNETFNNNVAPLL 689
S N A P + A ++E+KE C +++ Y++F+ LL ET N A L
Sbjct: 44 SKGNLACPFKARADNTYELRALMSEMKEKCTGKEE-YTKFFKLL-ETINKETAAKL 97
>SB_3005| Best HMM Match : Dicty_spore_N (HMM E-Value=6.8)
Length = 117
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 522 SSDNAAIPASKKRQTAVLTNANLAELKESCEMRDKLYSEFYSLLNETFNNNVAPLL 689
S N A P + A ++E+KE C +++ Y++F+ LL ET N A L
Sbjct: 40 SKGNLACPFKARADNTYELRALMSEMKEKCTGKEE-YTKFFKLL-ETINKETAAKL 93
>SB_25877| Best HMM Match : TP1 (HMM E-Value=8.5)
Length = 139
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 286 MPVMQDERKMSKRKKKVINNNKYILFNSWYTKIK 387
+PV +++ + K NN KY L WY+K++
Sbjct: 7 LPVQNQAKRLRTWRSKTRNNTKYKLICIWYSKVR 40
>SB_50241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/105 (21%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Frame = +1
Query: 259 KNINYILNVMPVMQDERKMSKRKKKVINNNKY---ILFNSWYTKIKQPEWPSSPAMWDLV 429
K + Y V +DE K+ RK+ + +Y ILFN++ ++ +W S + W
Sbjct: 29 KTMKYKYGCSDVPRDE-KLDLRKRSLYYLERYFYFILFNTYLNMERRSKWDRSFSQW--- 84
Query: 430 KNTPELADFVFIFDHTEKMGKKMADR*HRRLQATTQQFQRAKKDR 564
E+A ++D + G ++ RL+A +++ + + +
Sbjct: 85 --MTEVASSAGVYDILDNFGFHDFEKTEERLRALRWRWRESYRGK 127
>SB_6631| Best HMM Match : SOCS_box (HMM E-Value=1.5e-10)
Length = 330
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 500 PTDDIVVFKRQRSNSSEQKKTDCGAYQRKFGRIKREL 610
P D ++F+ SN S Q ++ G YQ F R + +L
Sbjct: 239 PEDASMLFELNTSNQSPQSRSTAGVYQLAFSRCQGKL 275
>SB_38410| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 368
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -2
Query: 372 PTVKQNVFIVVNHLLLAFGHFAFVLHDRHYVEDIVNVLFS 253
P N+ +++ +L A + + HDR + E N+LF+
Sbjct: 313 PREVHNILLLMGYLNSALNPYMYSFHDRQFKEAFKNILFN 352
>SB_47960| Best HMM Match : Extensin_2 (HMM E-Value=0.54)
Length = 710
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 199 RFQFIQQLFIFAHGRSFCRRLLLRHVYH 116
RF Q I+AH SF +R+LLR + H
Sbjct: 22 RFPRNPQKLIYAHQNSFKKRILLRRIEH 49
>SB_48322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -2
Query: 390 LLDLSVPTVKQNVFIVVNHLLLAFGHFAFVLHDRHYVEDIVNVLFSKKFT 241
L+ ++ T+K N NH+L F H F + + +E+ V+ F T
Sbjct: 102 LILTTLRTIKGNFMFFENHILAKFLHGKFFIGNPETIEESVDATFEFNLT 151
>SB_45954| Best HMM Match : VWA (HMM E-Value=4e-26)
Length = 715
Score = 28.3 bits (60), Expect = 8.0
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Frame = +3
Query: 483 DG*KNGRPMTSSSSSDNAAIPASKKRQTAV-LTNANLAELKESCEMRDKLYSEFYSLLNE 659
D K G +TS +SSD+A++PAS R V L A + E++D L ++
Sbjct: 597 DAHKFGVMITSRASSDSASVPASGVRDLGVNLAAAGVGAGVSLVELKD-LTGVDSNVFTT 655
Query: 660 TFNNNVAPLLSSIYDEVLTRDFLTKNMAKFKTVAPSCPLHRLLQN-TCPLRLAAA 821
T + + L+ SI + V A +C ++ + N TCP++ A
Sbjct: 656 TSYDGLNSLVESIRNAVGNAPLKVVCNANACKNGGTCNVYGVGFNCTCPIQWTGA 710
>SB_44509| Best HMM Match : EMI (HMM E-Value=4.2)
Length = 782
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/59 (22%), Positives = 31/59 (52%)
Frame = +3
Query: 3 SKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKNQTW*TCRSNNLLQKLRPCAKMKS 179
+++ C + +++ I+++ Q+ R +K+ K+ + TC +LR CA ++S
Sbjct: 67 TRKGACAVVQSSQKMIDIRRVRRQKSMRSCAKLSKDNRYSTCTPAEEYAQLRVCAVVRS 125
>SB_25738| Best HMM Match : Fer4 (HMM E-Value=1.1)
Length = 241
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -1
Query: 751 LNLAIFLVRKSRVNTSS*MLLSRGATLLLNV 659
L LA+FL +K RV SS +L++ +++LNV
Sbjct: 178 LALAVFLSKKFRVKKSSYLLVNLTGSVILNV 208
>SB_22629| Best HMM Match : CDC37 (HMM E-Value=3.7)
Length = 504
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -2
Query: 489 THLFSVIKNEHKICQFGRVFHQIPHGRATRPLGLLDLSVPT 367
TH SV+K K+C+ RV +Q H R R ++VPT
Sbjct: 395 THWRSVVKKGAKLCEDKRV-NQAKHKRHLRKTRAASVTVPT 434
>SB_12493| Best HMM Match : RrnaAD (HMM E-Value=4.6)
Length = 984
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/59 (22%), Positives = 31/59 (52%)
Frame = +3
Query: 3 SKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKNQTW*TCRSNNLLQKLRPCAKMKS 179
+++ C + +++ I+++ Q+ R +K+ K+ + TC +LR CA ++S
Sbjct: 834 TRKGACAVVQSSQKMIDIRRVRRQKSMRSCAKLSKDNRYSTCTPAEEYAQLRVCAVVRS 892
>SB_57364| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -2
Query: 489 THLFSVIKNEHKICQFGRVFHQIPHGRATRPLGLLDLSVPT 367
TH SV+K K+C+ RV +Q H R R ++VPT
Sbjct: 240 THWRSVVKKGAKLCEDKRV-NQAKHKRHLRKTRAASVTVPT 279
>SB_38222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -2
Query: 489 THLFSVIKNEHKICQFGRVFHQIPHGRATRPLGLLDLSVPT 367
TH SV+K K+C+ RV +Q H R R ++VPT
Sbjct: 289 THWRSVVKKGAKLCEDKRV-NQAKHKRHLRKTRAASVTVPT 328
>SB_13733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1455
Score = 28.3 bits (60), Expect = 8.0
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +1
Query: 385 KQPEWPSSPAMWDLVKNTPELADFVFIFDHTEKMGKKMADR*HRR-LQATTQ----QFQR 549
++ EW + L +TP+L DF F K K+ A + RR + TTQ QF+R
Sbjct: 972 REKEWIIKIQLLQLTSSTPDLDDFYFQTYIRRKQAKERAKQGERRDGENTTQMALPQFER 1031
Query: 550 AKKD 561
+++
Sbjct: 1032 EERN 1035
>SB_6135| Best HMM Match : CSD (HMM E-Value=5.4)
Length = 254
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -2
Query: 489 THLFSVIKNEHKICQFGRVFHQIPHGRATRPLGLLDLSVPT 367
TH SV+K K+C+ RV +Q H R R ++VPT
Sbjct: 198 THWRSVVKKGAKLCEDKRV-NQAKHKRHLRKTRAASVTVPT 237
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,219,946
Number of Sequences: 59808
Number of extensions: 571705
Number of successful extensions: 1455
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1453
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2311562737
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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