Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120471.Seq
         (826 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-545|AAF59166.2|  922|Drosophila melanogaster CG14766-PA...    32   0.83 
AE013599-2836|AAM70845.1|  947|Drosophila melanogaster CG7097-PB...    30   4.4  
AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA...    30   4.4  
DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster calmodulin-b...    29   7.7  

>AE013599-545|AAF59166.2|  922|Drosophila melanogaster CG14766-PA
            protein.
          Length = 922

 Score = 32.3 bits (70), Expect = 0.83
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = +3

Query: 543  PASKKRQTAVLTNANLA--ELKESCEMRDKLYSEFYSLLNETFNNNVAPLLSSIYDEVLT 716
            P S+KR+   +T  N +  E K        LYS +  +++ET  N  +PL    Y   L 
Sbjct: 827  PVSEKRELISITKPNQSDCEAKHRSHKDVNLYSRYPKIISETLENLTSPLRFENYTRELL 886

Query: 717  RDFLTKNMAK 746
            + +   ++ K
Sbjct: 887  KAYKALDVTK 896


>AE013599-2836|AAM70845.1|  947|Drosophila melanogaster CG7097-PB,
           isoform B protein.
          Length = 947

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = +2

Query: 68  SSRIQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVN 247
           SS   +  ++ L +S+    P   SS       ++E   N LE S    S+MDQLI ++ 
Sbjct: 452 SSSNSSHLYQNLLRSSSGETPAGSSSAGNNCDYRHENNQNGLEDSPRRHSSMDQLIGLLE 511

Query: 248 FLEKRTLTIS 277
            + K   T S
Sbjct: 512 NMGKSPRTRS 521


>AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA,
           isoform A protein.
          Length = 1218

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = +2

Query: 68  SSRIQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVN 247
           SS   +  ++ L +S+    P   SS       ++E   N LE S    S+MDQLI ++ 
Sbjct: 723 SSSNSSHLYQNLLRSSSGETPAGSSSAGNNCDYRHENNQNGLEDSPRRHSSMDQLIGLLE 782

Query: 248 FLEKRTLTIS 277
            + K   T S
Sbjct: 783 NMGKSPRTRS 792


>DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster
            calmodulin-binding transcriptionactivator protein.
          Length = 2009

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 122  NMPEQQSSTETAAVCKNEKLLNKLESSSYNKSN 220
            N  +Q ++T TAA C N K  N L   S+  +N
Sbjct: 1021 NQQQQITTTSTAATCDNLKSANALSEDSHTVNN 1053


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,636,551
Number of Sequences: 53049
Number of extensions: 809305
Number of successful extensions: 2255
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2255
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)