Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120470.Seq
         (732 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    25   0.48 
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    25   0.48 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   5.9  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    22   5.9  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +1

Query: 505 PFGLLVAGADFKFKSSFGIPKKCAICQQL 591
           PF   V+G++ + K+ + IPK C +  Q+
Sbjct: 363 PFISRVSGSEIQTKTGYTIPKDCMVNLQI 391


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +1

Query: 505 PFGLLVAGADFKFKSSFGIPKKCAICQQL 591
           PF   V+G++ + K+ + IPK C +  Q+
Sbjct: 363 PFISRVSGSEIQTKTGYTIPKDCMVNLQI 391


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +2

Query: 356 TYLHCGHSCLCTD 394
           T +H GH C C +
Sbjct: 354 TTIHAGHKCTCPE 366


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 64   QPPRSTTCTTVALRRKRFEFWLA 132
            QPP   TCTT+  +  R   W++
Sbjct: 1102 QPPDKATCTTLTAQTIRVS-WVS 1123


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 314 CMRCRRSFAVYPAVTYLHC 370
           C  CR SF     +T  HC
Sbjct: 81  CYCCRESFLRERTITLTHC 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,895
Number of Sequences: 336
Number of extensions: 3422
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)