Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120470.Seq
         (732 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70205-2|CAA94116.1|  529|Caenorhabditis elegans Hypothetical pr...    35   0.068
U40945-6|AAS80346.1|  437|Caenorhabditis elegans Hypothetical pr...    34   0.12 
U40945-5|AAS80344.1|  617|Caenorhabditis elegans Hypothetical pr...    34   0.12 
Z81505-1|CAB04122.1|  673|Caenorhabditis elegans Hypothetical pr...    33   0.21 
Z19156-1|CAA79563.1|  160|Caenorhabditis elegans Hypothetical pr...    31   0.84 
AL117202-18|CAB57896.3|  765|Caenorhabditis elegans Hypothetical...    31   1.1  
Z72511-3|CAA96657.1|  610|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z75710-9|CAB00024.2|  752|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U53337-2|AAA96184.1|  639|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z81129-4|CAB03405.1|  330|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z81562-7|CAB04561.1|  367|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr...    28   7.8  
U41104-3|AAK18975.1|  378|Caenorhabditis elegans Hypothetical pr...    28   7.8  
U11280-3|AAM97952.1|  403|Caenorhabditis elegans Hypothetical pr...    28   7.8  
U11280-2|AAK77637.1|  452|Caenorhabditis elegans Hypothetical pr...    28   7.8  
U11280-1|AAA19436.1|  450|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z70205-2|CAA94116.1|  529|Caenorhabditis elegans Hypothetical
           protein C11H1.3 protein.
          Length = 529

 Score = 34.7 bits (76), Expect = 0.068
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +2

Query: 362 LHCGHSCLCTDCDETVNV-DNTCPKCKSGIRYKLKYKTL*HVALRNGDFRLVYL 520
           L C H C+C++C +++    N CP C+S  R  ++ +   H   RN  +  V L
Sbjct: 282 LPCRHLCVCSNCADSLRYKHNNCPICRSPFRALIRLRA--HRQTRNQIYETVSL 333


>U40945-6|AAS80346.1|  437|Caenorhabditis elegans Hypothetical
           protein F10D7.5c protein.
          Length = 437

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +2

Query: 368 CGHSCLCTDCD-ETVNVDNTCPKCKSGIRYKLK-YKT 472
           CGH C+C +C    +    TCP C++ ++  +K YK+
Sbjct: 401 CGHMCMCFECGRRLLTTKGTCPICRAPVQDVIKTYKS 437


>U40945-5|AAS80344.1|  617|Caenorhabditis elegans Hypothetical
           protein F10D7.5a protein.
          Length = 617

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +2

Query: 368 CGHSCLCTDCD-ETVNVDNTCPKCKSGIRYKLK-YKT 472
           CGH C+C +C    +    TCP C++ ++  +K YK+
Sbjct: 581 CGHMCMCFECGRRLLTTKGTCPICRAPVQDVIKTYKS 617


>Z81505-1|CAB04122.1|  673|Caenorhabditis elegans Hypothetical
           protein F16A11.1 protein.
          Length = 673

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +2

Query: 323 CRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGIRYKLK 463
           C   FA   + T L C H   C+DC    N+ + CP C+  I  +++
Sbjct: 564 CTICFAAPGSTTLLPCNHDGFCSDC---CNMMDHCPLCRKPIEERIQ 607


>Z19156-1|CAA79563.1|  160|Caenorhabditis elegans Hypothetical
           protein T02C1.1 protein.
          Length = 160

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +2

Query: 305 DSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDET-VNVDNTCPKCKS 442
           D  C  C   F V P +  + CGHS  C  C E+ +N++  CP C++
Sbjct: 5   DFCCAVCL-DFFVEPCI--IECGHS-YCRFCIESHLNINEKCPLCRA 47


>AL117202-18|CAB57896.3|  765|Caenorhabditis elegans Hypothetical
           protein Y47D3A.22 protein.
          Length = 765

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 368 CGHSCLCTDCDETVNVDNTCPKCKSGI 448
           CGH   C DC E V +   CP C+  I
Sbjct: 623 CGHRVACVDCTEKVAI-RRCPVCRQFI 648


>Z72511-3|CAA96657.1|  610|Caenorhabditis elegans Hypothetical
           protein F55A11.3 protein.
          Length = 610

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/59 (25%), Positives = 25/59 (42%)
 Frame = +2

Query: 272 PLNTECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCKSGI 448
           P+ +  ++ A+D+ C+ CR    V  +   L C H               TCP C++ I
Sbjct: 278 PVVSAEDLAAMDATCIICREEMTVDASPKRLPCSHVFHAHCLRSWFQRQQTCPTCRTDI 336


>Z75710-9|CAB00024.2|  752|Caenorhabditis elegans Hypothetical
           protein D1081.3 protein.
          Length = 752

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 15/93 (16%)
 Frame = +3

Query: 54  QFTPTAALNNMHDGRV---KTQALRVLARSLPPLYDSTVDRHGCK------------VFT 188
           QF P    N   DG +   K QA++     L  LYD  V   G K             F 
Sbjct: 525 QFKPLKIKNLHDDGWICTDKYQAMQDRGGPLVKLYDDKVTAIGIKSTTGYNSNQYEYYFD 584

Query: 189 VRRYNRRVIDFAGIRNKTLEIIRPTETCRSTQN 287
           +R+YN  + +F+G+  K   + RP+    S+ N
Sbjct: 585 LRKYNNEICEFSGVCTKG-PVGRPSSEASSSSN 616


>U53337-2|AAA96184.1|  639|Caenorhabditis elegans Hypothetical
           protein R02E12.4 protein.
          Length = 639

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +2

Query: 317 MRCRRSFAV-YPAVTYLHCGHSCLCTDC-DETVNVDNTCPKCKSGIR 451
           ++C   F V +  VT+L C HS +C  C    ++  + CP C++ +R
Sbjct: 24  VQCHICFQVNHEPVTFLTCKHS-ICAGCAGRWLSSCSVCPMCRTRVR 69


>Z81129-4|CAB03405.1|  330|Caenorhabditis elegans Hypothetical
           protein T23F1.6 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -1

Query: 234 CECPQSQLHVCCSAAP*TPCSRA 166
           C C Q+     CS  P TPCS A
Sbjct: 38  CSCQQASQQYSCSCQPSTPCSCA 60


>Z81562-7|CAB04561.1|  367|Caenorhabditis elegans Hypothetical
           protein K03D7.11 protein.
          Length = 367

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -3

Query: 466 VFQFISNAAFTFRTRIVHVYRFVAIGAQTRMSAMQIGNGGVNCETSS 326
           VF +  +A+FT  T  + V+  VAI     +    + NG +NC T +
Sbjct: 113 VFSYNVSASFTRITEKISVWLAVAIAVIRTLVMRYLVNGRINCWTDA 159


>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical protein
            ZK1067.2 protein.
          Length = 2219

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 2/79 (2%)
 Frame = +2

Query: 209  CN*LCGHSQQNAGNH*TDRNLPLNT--ECNVKAVDSACMRCRRSFAVYPAVTYLHCGHSC 382
            C+ LC     N  N    R+  L    ECNVK     C               L CGH+C
Sbjct: 1835 CSKLCALCVNNCSNKCAHRSCTLKCFEECNVKPCTEPC------------TDKLKCGHAC 1882

Query: 383  LCTDCDETVNVDNTCPKCK 439
            L    ++   +  TC + K
Sbjct: 1883 LGICGEQCPKICGTCERNK 1901


>U41104-3|AAK18975.1|  378|Caenorhabditis elegans Hypothetical
           protein T12C9.1 protein.
          Length = 378

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +2

Query: 311 ACMRCRRSF--AVYPAVTYLHCGHSCLCTDCDETVNVDNTCPKCK 439
           AC  C   F  +V  + TYL  G++    DCD TVN+   C  C+
Sbjct: 29  ACRACAAFFRRSVSQSKTYLCQGNN----DCDVTVNIRCMCRACR 69


>U11280-3|AAM97952.1|  403|Caenorhabditis elegans Hypothetical
           protein T17E9.2c protein.
          Length = 403

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query: 545 NLPLAYQKSVLFASNSAKVNERIKRLARDNNDDDDSYF---YHKQFIK 679
           +LP  ++ S +  S+  ++NE    L R+  +DDDS F   Y   F+K
Sbjct: 57  SLPAGFRWSNVDLSDEEQLNELYNLLTRNYVEDDDSMFRFDYSADFLK 104


>U11280-2|AAK77637.1|  452|Caenorhabditis elegans Hypothetical
           protein T17E9.2b protein.
          Length = 452

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query: 545 NLPLAYQKSVLFASNSAKVNERIKRLARDNNDDDDSYF---YHKQFIK 679
           +LP  ++ S +  S+  ++NE    L R+  +DDDS F   Y   F+K
Sbjct: 106 SLPAGFRWSNVDLSDEEQLNELYNLLTRNYVEDDDSMFRFDYSADFLK 153


>U11280-1|AAA19436.1|  450|Caenorhabditis elegans Hypothetical
           protein T17E9.2a protein.
          Length = 450

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +2

Query: 545 NLPLAYQKSVLFASNSAKVNERIKRLARDNNDDDDSYF---YHKQFIK 679
           +LP  ++ S +  S+  ++NE    L R+  +DDDS F   Y   F+K
Sbjct: 104 SLPAGFRWSNVDLSDEEQLNELYNLLTRNYVEDDDSMFRFDYSADFLK 151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,449,927
Number of Sequences: 27780
Number of extensions: 328340
Number of successful extensions: 1071
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)