Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120469.Seq
         (785 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68105-1|CAA92122.2|  195|Caenorhabditis elegans Hypothetical pr...    62   3e-10
Z78544-2|CAB01758.1|  368|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical pr...    29   3.8  
L23645-7|AAK26132.2|  157|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AL110487-2|CAB54425.1|  445|Caenorhabditis elegans Hypothetical ...    28   6.6  
AF000264-4|AAC71125.3|  631|Caenorhabditis elegans Hypothetical ...    28   8.7  

>Z68105-1|CAA92122.2|  195|Caenorhabditis elegans Hypothetical
           protein F13E6.1 protein.
          Length = 195

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 29/83 (34%), Positives = 52/83 (62%)
 Frame = +3

Query: 255 EDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITEDVNQGLKNVKESQVYQSIENRVAAL 434
           E+EI+TL+ VL ++ + +++LKRKLG+T + E+++D+N+ LK V ++  YQ      AA 
Sbjct: 72  EEEISTLKQVLSARQKHAAELKRKLGLTPFSELSQDINRSLKTVTDTDAYQKTAEVAAAT 131

Query: 435 TNAVTETPIYQKTESVIKTTAEK 503
           ++ V E     +  S+ K+   K
Sbjct: 132 SDTVKEKWNDMRNSSLFKSFESK 154



 Score = 33.1 bits (72), Expect = 0.23
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +2

Query: 476 ICDKNDRREDVSIIGGITAGVSSKLGQMRNSESFRSIEERVGSAYENVK 622
           + D +  ++   +    +  V  K   MRNS  F+S E ++GSA  N K
Sbjct: 115 VTDTDAYQKTAEVAAATSDTVKEKWNDMRNSSLFKSFESKLGSALNNAK 163


>Z78544-2|CAB01758.1|  368|Caenorhabditis elegans Hypothetical
           protein K04G11.3 protein.
          Length = 368

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +3

Query: 342 WKEITEDVNQGLKNVKESQVYQSIENRVAALTNAVTETPIYQKTESVIK 488
           W+++ +   +  K VK+ Q   S+ENR A      +  P Y++  + +K
Sbjct: 169 WQKLLQFEEKSNKQVKKPQCEISMENRQAGNNEMTSPEPTYKELSNTVK 217


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
           protein K10G4.5 protein.
          Length = 1251

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +2

Query: 569 ESFRSIEERVGSAYENVKGKVASRSNSTQSFDEALRDAMAPPCPPF-PSTSR 721
           +  R+I+ +V   YE     + S SN     DE L D   PP  PF P+++R
Sbjct: 265 DDLRAIK-KVSLNYEGNCKAIFSSSNMNHIADETLDDLFGPPIGPFIPNSTR 315


>Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical
           protein T23G5.2a protein.
          Length = 719

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 611 ENVKGKVAS-RSNSTQSFDEALRDAMAPPCPPFPSTSRCP 727
           EN +G VAS  S  + SF      ++APP PP P T R P
Sbjct: 685 ENFRGSVASLESCRSSSFS-----SIAPPTPPTPGTPRNP 719


>L23645-7|AAK26132.2|  157|Caenorhabditis elegans Hypothetical
           protein F54F2.7 protein.
          Length = 157

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = +2

Query: 326 TWHHGVERDHRGRQSGFEKRQRKPSLSIDRESRGCSYKCRDRNTHI 463
           T  HG +R    + SG   + +K +L +  +S+ C++KC+D + H+
Sbjct: 55  TKKHGADRS-TNQVSG---KGKKGALILQPDSKLCTFKCKDGSEHV 96


>AL110487-2|CAB54425.1|  445|Caenorhabditis elegans Hypothetical
           protein Y39E4B.2 protein.
          Length = 445

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +3

Query: 300 RQSSDLKRKLGITVWKEITEDVNQGLKNVKESQVYQSIEN 419
           ++ S LK KLGIT W ++ + + +  K +K S   Q++E+
Sbjct: 204 KEYSRLKMKLGITSWMKLKDPIEELKKIIKTS--LQAVES 241


>AF000264-4|AAC71125.3|  631|Caenorhabditis elegans Hypothetical
           protein F43E2.3 protein.
          Length = 631

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = +2

Query: 521 GITAGVSSKLGQMRNSES-FRSIEERVGS-AYENVKGKVASRSNSTQSFDEALRDAMAPP 694
           G    +S  L Q  NS S  R+   +    +YE  +     R NS +S  +  R+ +  P
Sbjct: 86  GFRGNISRALSQKSNSPSGCRTPTPKTAPPSYEQFQ---VLRRNSMKSSVQPQRNGILSP 142

Query: 695 CPPFPSTSR 721
            PP P++SR
Sbjct: 143 APPVPTSSR 151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,090,799
Number of Sequences: 27780
Number of extensions: 344429
Number of successful extensions: 1256
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)