Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120469.Seq
(785 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20340.1 68418.m02420 beta-1,3-glucanase (BG5) identical to p... 32 0.50
At1g12080.2 68414.m01397 expressed protein 31 0.66
At3g10800.1 68416.m01300 bZIP transcription factor family protei... 31 1.1
At1g06530.1 68414.m00692 myosin heavy chain-related similar to m... 30 1.5
At5g20330.1 68418.m02419 beta-1,3-glucanase (BG4) identical to t... 29 2.6
At1g34320.1 68414.m04259 expressed protein contains Pfam domain ... 29 3.5
At1g19230.1 68414.m02393 respiratory burst oxidase protein E (Rb... 29 3.5
At4g10270.1 68417.m01688 wound-responsive family protein similar... 29 4.6
At5g42250.1 68418.m05143 alcohol dehydrogenase, putative similar... 28 6.1
At4g31390.1 68417.m04452 ABC1 family protein contains Pfam domai... 28 6.1
At1g64790.1 68414.m07346 translational activator family protein ... 28 6.1
At5g59810.1 68418.m07499 subtilase family protein subtilisin-lik... 28 8.1
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 28 8.1
At5g12220.1 68418.m01434 las1-like family protein similar to Las... 28 8.1
At2g42340.1 68415.m05240 expressed protein 28 8.1
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 28 8.1
At1g61850.1 68414.m06979 patatin family protein similar to membr... 28 8.1
At1g30760.1 68414.m03761 FAD-binding domain-containing protein s... 28 8.1
>At5g20340.1 68418.m02420 beta-1,3-glucanase (BG5) identical to
plant beta-1,3-glucanase bg5 GI:2808439 [Arabidopsis
thaliana]
Length = 354
Score = 31.9 bits (69), Expect = 0.50
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -1
Query: 467 LVYGCFGHGICKSSHAI-LYRLIDLAFFDVFQTLIDVLGDLFPHRDAKFTF*VRALTDLA 291
L YG G + S I LY+ ID+ +F +VL L HRD T VR A
Sbjct: 45 LNYGLLGDNLPSPSKVITLYKSIDITKIRIFDPNTEVLNALRGHRDIAVTVGVRDQDLAA 104
Query: 290 LQYSSQS 270
L S ++
Sbjct: 105 LSASEEA 111
>At1g12080.2 68414.m01397 expressed protein
Length = 138
Score = 31.5 bits (68), Expect = 0.66
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 378 KNVKESQVYQSIENRVAALTNAVTETPIYQKTESVIKTTAEK 503
+ V E++V Q E V A+T +E PI + E V+ AEK
Sbjct: 26 ETVVETEVTQQPEESVPAVTEQKSEAPIVETNEEVVVEEAEK 67
>At3g10800.1 68416.m01300 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; contains similarity to TGACG-sequence specific
DNA-binding protein TGA-1B (HSBF) GB:P14233 [Nicotiana
tabacum]
Length = 675
Score = 30.7 bits (66), Expect = 1.1
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Frame = +2
Query: 362 RQSGFEKRQRKPSLSIDRESRGCSYKCRDRNTHIPKN*ICDKNDRREDVSIIGGITAGVS 541
++S KR+++ S E R C Y+ D + N D +D+R+ +I I S
Sbjct: 148 QKSSVSKRKKENGDS-SGELRSCKYQKSDDKSVATNNEGDDDDDKRK---LIRQIRNRES 203
Query: 542 SKLGQMRNSESFRSIEERVGS---AYENVKGKVASRSNSTQSFDEALRDAM-APPCPPFP 709
++L ++R + +E +V S + GK+A + + + A APP P+
Sbjct: 204 AQLSRLRKKQQTEELERKVKSMNATIAELNGKIAYVMAENVALRQQMAVASGAPPMNPYM 263
Query: 710 STSRCP 727
+ P
Sbjct: 264 AAPPLP 269
>At1g06530.1 68414.m00692 myosin heavy chain-related similar to
myosin heavy chain (GI:1408194) {Placopecten
magellanicus}; similar to Myosin heavy chain, clone 203
(Fragment) (SP:P39922){Hydra attenuata}; contains one
transmembrane domain
Length = 323
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +3
Query: 255 EDEIATLRTVLQSKIRQSSDLKRKLGITVWKEITEDVNQGLKNVKESQVYQSIENR 422
E E+A LRTV + ++ +L+ KLG KE+ E + K E ++ + I+N+
Sbjct: 150 EKEVAGLRTVKEENEKRMKELESKLGALEVKELDE---KNKKFRAEEEMREKIDNK 202
>At5g20330.1 68418.m02419 beta-1,3-glucanase (BG4) identical to to
plant beta-1,3-glucanase bg4 GI:2808438 from
[Arabidopsis thaliana]
Length = 345
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -1
Query: 467 LVYGCFGHGICKSSHAI-LYRLIDLAFFDVFQTLIDVLGDLFPHRDAKFTF*VRALTDLA 291
L YG G + S+ I LY+ I ++ +F +VL L HRD + T V+ DLA
Sbjct: 36 LNYGLLGDNLPSPSNVINLYKSIGISRIRIFDPNTEVLNALRGHRDIEVTVGVKD-QDLA 94
Query: 290 LQYSSQ 273
+S+
Sbjct: 95 ALAASE 100
>At1g34320.1 68414.m04259 expressed protein contains Pfam domain
PF05003: protein of unknown function (DUF668)
Length = 657
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +3
Query: 258 DEIATLRTVLQSKIRQSSDLKRKLGITVWKEITEDVNQGLKNV 386
D +A LRT L+S+ + +LK+K ++W I E+V + L +V
Sbjct: 310 DTLAILRTELKSQKKHVRNLKKK---SLWSRILEEVMEKLVDV 349
>At1g19230.1 68414.m02393 respiratory burst oxidase protein E
(RbohE) / NADPH oxidase nearly identical to respiratory
burst oxidase protein E GI:3242787 [gi:3242787] from
[Arabidopsis thaliana]
Length = 926
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2
Query: 74 HSFHTVRVFHCKI*AVFKQLKKQCQ 148
H TV VF+C I V K+LKKQ Q
Sbjct: 885 HPNSTVGVFYCGIQTVAKELKKQAQ 909
>At4g10270.1 68417.m01688 wound-responsive family protein similar to
wound induced protein (GI:19320) [Lycopersicon
esculentum]
Length = 90
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 315 LKRKLGITVWKEITEDVNQGLK-NVKE-SQVYQSIENRVAALTNAVTETPIYQKTESVIK 488
LK +LG+ W I VNQ L+ NV+ SQ + + V+A + E+ +K E ++
Sbjct: 20 LKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSAAVTSSGESEKAKKAEESLR 79
Query: 489 T 491
T
Sbjct: 80 T 80
>At5g42250.1 68418.m05143 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 390
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 755 CGVTAQCPAQGSGLCSGMGGKVAPW 681
CG C + S LCS KV+PW
Sbjct: 108 CGDCVDCKSHKSNLCSKFPFKVSPW 132
>At4g31390.1 68417.m04452 ABC1 family protein contains Pfam domain,
PF03109: ABC1 family
Length = 682
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 563 NSESFRSIEERVGSAYENVKGKVASRSNSTQSFDEALR 676
N +F IEE +G EN+ K++S++ + S + R
Sbjct: 215 NEVAFNIIEEELGQPLENIFSKISSQTIAAASLGQVYR 252
>At1g64790.1 68414.m07346 translational activator family protein
similar to HsGCN1 [Homo sapiens] GI:2282576
Length = 2440
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/72 (23%), Positives = 34/72 (47%)
Frame = -1
Query: 371 LIDVLGDLFPHRDAKFTF*VRALTDLALQYSSQSRDFIFTRASSRLHSARNWSACSGVRP 192
+ D+L DL H D + ++ + QY ++ + + + L +++NW A G
Sbjct: 2204 IFDLLKDLMHHEDDQVRISATSMLGVLSQYLEAAQLSVLLQEVNDLSASQNWGARHGSVL 2263
Query: 191 ANSSGVCMSPAT 156
SS + +P+T
Sbjct: 2264 CISSLLKHNPST 2275
>At5g59810.1 68418.m07499 subtilase family protein subtilisin-like
protease AIR3, Arabidopsis thaliana, EMBL:AF098632
Length = 778
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 752 GVTAQCPAQGSGLCSGMGGKVAPW 681
GVT C A SG SG VAPW
Sbjct: 327 GVTVVCSAGNSGPKSGTVSNVAPW 350
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical
to cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 27.9 bits (59), Expect = 8.1
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 2/117 (1%)
Frame = +2
Query: 380 KRQRKPSLSIDRESRGCSYKCRDRNTHIPKN*ICDKNDRREDVSIIGGITAGVSSKLG-- 553
KR +K + DR+ ++ + N+H+P N + G +T SSK+
Sbjct: 235 KRIKKEAGGSDRKGEDTVHRDKSNNSHVPGGRTASGNS--DSKKSKGLLTEKTSSKVSAD 292
Query: 554 QMRNSESFRSIEERVGSAYENVKGKVASRSNSTQSFDEALRDAMAPPCPPFPSTSRC 724
+ NS + E+ +GK+A R DE+ R A P C + +C
Sbjct: 293 KHENSPGIKVGVSGKKRRLESEQGKLAPR------VDESSRAAKKPRCESADNKVKC 343
>At5g12220.1 68418.m01434 las1-like family protein similar to Las1p
[Saccharomyces cerevisiae] GI:495504; contains Pfam
profile PF04031: Las1-like
Length = 611
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 470 N*ICDKNDRREDVSIIGGITA-GVSSKLGQMRNSESFRSI 586
N + +K RREDVSI A G+ KL +R+ S R +
Sbjct: 119 NCVIEKTRRREDVSIADAARAIGIPRKLIDLRHEGSHREL 158
>At2g42340.1 68415.m05240 expressed protein
Length = 349
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 575 FRSIEERVGSAYENVKGKVASRSNSTQSFDEALRDA-MAPPCPPFPSTSRCPERDTELSL 751
F+S+EE V EN+ + ++ +S +A +A PP PP PS + + T +
Sbjct: 38 FKSLEEVVSKLTENLNLTESQIASIWKSLIKAEEEAQQVPPPPPPPSAADVSSKSTRKKM 97
Query: 752 HTSQS 766
S
Sbjct: 98 KKQAS 102
>At1g76780.1 68414.m08935 expressed protein ; expression supported by
MPSS
Length = 1871
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 312 DLKRKLGITVWKEITEDVNQGLKNVKESQVYQSIENRVAALTNAVTETP-IYQKTESVIK 488
D + + G K T+DV + ++ +KE ++Y+ +T V ET Y+K E K
Sbjct: 831 DCEEEEGSEESKIKTDDVVRKVQGIKEEELYKPKREHGTKITELVEETTGDYEKQEE--K 888
Query: 489 TTAE 500
TAE
Sbjct: 889 ETAE 892
>At1g61850.1 68414.m06979 patatin family protein similar to
membrane-associated calcium-independent phospholipase A2
gamma; IPLA2 gamma [Homo sapiens] GI:8453174; contains
Patatin domain PF01734, PF00514:
Armadillo/beta-catenin-like repeat
Length = 1265
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 220 LRAEWSRELARVKMKSRL*ELYCKARSVKART*NVNLASRCGKRSPRTS 366
+ A+ S + RVK +R E +C +K + + C K SP T+
Sbjct: 859 MEAQHSPDSGRVKYHARALESFCSNNGIKLSSLHTTATPGCQKPSPGTA 907
>At1g30760.1 68414.m03761 FAD-binding domain-containing protein
similar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 534
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 712 AREWGARWRHGVTQRLVEALSRVRSRSYF 626
AREWG R+ G +RLVE ++ ++F
Sbjct: 495 AREWGNRYFKGNFERLVEIKAKFDPENFF 523
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,153,134
Number of Sequences: 28952
Number of extensions: 323478
Number of successful extensions: 1181
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1765546400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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