Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120468.Seq
         (821 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF297644-1|AAK15256.1| 3497|Drosophila melanogaster dystrophin-l...    29   7.7  
AE014297-2671|ABI31178.1| 3504|Drosophila melanogaster CG34157-P...    29   7.7  
AE014297-2669|AAF55673.2| 3497|Drosophila melanogaster CG34157-P...    29   7.7  
AE014297-2668|ABI31176.1| 3598|Drosophila melanogaster CG34157-P...    29   7.7  
AE014297-2666|ABI31180.1| 3529|Drosophila melanogaster CG34157-P...    29   7.7  

>AF297644-1|AAK15256.1| 3497|Drosophila melanogaster dystrophin-like
            protein DLP2 protein.
          Length = 3497

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 13/41 (31%), Positives = 29/41 (70%)
 Frame = +2

Query: 662  RLNNENTSTDYDTEDEERVNTFNSRKRRVVAKRALIRNSKK 784
            R + ENTST +   ++ R+ +F+ +++RV  +R ++R+S++
Sbjct: 1847 RPSAENTSTPFLRVEKRRI-SFDEKRKRVANERDILRDSEE 1886


>AE014297-2671|ABI31178.1| 3504|Drosophila melanogaster CG34157-PG,
            isoform G protein.
          Length = 3504

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 13/41 (31%), Positives = 29/41 (70%)
 Frame = +2

Query: 662  RLNNENTSTDYDTEDEERVNTFNSRKRRVVAKRALIRNSKK 784
            R + ENTST +   ++ R+ +F+ +++RV  +R ++R+S++
Sbjct: 1854 RPSAENTSTPFLRVEKRRI-SFDEKRKRVANERDILRDSEE 1893


>AE014297-2669|AAF55673.2| 3497|Drosophila melanogaster CG34157-PA,
            isoform A protein.
          Length = 3497

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 13/41 (31%), Positives = 29/41 (70%)
 Frame = +2

Query: 662  RLNNENTSTDYDTEDEERVNTFNSRKRRVVAKRALIRNSKK 784
            R + ENTST +   ++ R+ +F+ +++RV  +R ++R+S++
Sbjct: 1847 RPSAENTSTPFLRVEKRRI-SFDEKRKRVANERDILRDSEE 1886


>AE014297-2668|ABI31176.1| 3598|Drosophila melanogaster CG34157-PH,
            isoform H protein.
          Length = 3598

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 13/41 (31%), Positives = 29/41 (70%)
 Frame = +2

Query: 662  RLNNENTSTDYDTEDEERVNTFNSRKRRVVAKRALIRNSKK 784
            R + ENTST +   ++ R+ +F+ +++RV  +R ++R+S++
Sbjct: 1847 RPSAENTSTPFLRVEKRRI-SFDEKRKRVANERDILRDSEE 1886


>AE014297-2666|ABI31180.1| 3529|Drosophila melanogaster CG34157-PF,
            isoform F protein.
          Length = 3529

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 13/41 (31%), Positives = 29/41 (70%)
 Frame = +2

Query: 662  RLNNENTSTDYDTEDEERVNTFNSRKRRVVAKRALIRNSKK 784
            R + ENTST +   ++ R+ +F+ +++RV  +R ++R+S++
Sbjct: 1879 RPSAENTSTPFLRVEKRRI-SFDEKRKRVANERDILRDSEE 1918


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,100,670
Number of Sequences: 53049
Number of extensions: 497488
Number of successful extensions: 1153
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)