Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120467.Seq
(827 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292379-1|CAL23191.2| 376|Tribolium castaneum gustatory recept... 24 1.3
DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc gr... 23 2.2
AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombi... 23 3.9
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.2
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.2
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.2
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.2
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.2
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 22 6.8
>AM292379-1|CAL23191.2| 376|Tribolium castaneum gustatory receptor
candidate 58 protein.
Length = 376
Score = 24.2 bits (50), Expect = 1.3
Identities = 14/86 (16%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = -1
Query: 434 TRFVNYTRGAISKSQFLRVDLQVLGRYCASNQILQKSTVIVK*LIANT-TSMRSGVGHVE 258
T ++ Y R + +F + ++LG + ++ ++I+ L + + +++
Sbjct: 57 TCWIIYVRIYCKEIRFFEISFEILGSLDSLILLMVLVSIILGSLKTKEWAKLNNKFQYID 116
Query: 257 KRNSSRDTREQNVFGFVVSRMLLVVA 180
++ +RD +E+N+F +++L ++
Sbjct: 117 EKLKTRDQKERNLFKNAYFQLVLSIS 142
>DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc
growth factor 2 protein.
Length = 439
Score = 23.4 bits (48), Expect = 2.2
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -1
Query: 509 WLTFHDVTASYRVVQLGAVGHRRHQTRFVNYTRGAISKSQFLRVDLQVL 363
W + A +V+ A HR V RGA K++ L V L VL
Sbjct: 173 WHSVKKTVAGDKVLDENAAEHREQFVSLVRELRGAF-KAENLLVTLTVL 220
>AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine
recombinase protein.
Length = 340
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 456 GPELYNPIRSSDIMKSQPIVCKLETF*NLKATHVSWTERLADTKNTR 596
GP + P+ K +P++C + T + ++ TE L + TR
Sbjct: 207 GPHKFQPLLRLPKFKKKPLLCVVSTL----SCYLERTELLRSSGETR 249
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 22.2 bits (45), Expect = 5.2
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 502 LFMMSLLLIGLYNSGPSGTDATRPVSSIIHVALFLNL 392
+ + S+ L+G SG T V+ ++ + +FLNL
Sbjct: 223 VLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNL 259
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.2 bits (45), Expect = 5.2
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 502 LFMMSLLLIGLYNSGPSGTDATRPVSSIIHVALFLNL 392
+ + S+ L+G SG T V+ ++ + +FLNL
Sbjct: 223 VLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNL 259
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.2 bits (45), Expect = 5.2
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 502 LFMMSLLLIGLYNSGPSGTDATRPVSSIIHVALFLNL 392
+ + S+ L+G SG T V+ ++ + +FLNL
Sbjct: 223 VLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNL 259
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.2 bits (45), Expect = 5.2
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 502 LFMMSLLLIGLYNSGPSGTDATRPVSSIIHVALFLNL 392
+ + S+ L+G SG T V+ ++ + +FLNL
Sbjct: 223 VLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNL 259
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.2 bits (45), Expect = 5.2
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 502 LFMMSLLLIGLYNSGPSGTDATRPVSSIIHVALFLNL 392
+ + S+ L+G SG T V+ ++ + +FLNL
Sbjct: 223 VLISSMALLGFTLPPDSGEKLTLGVTILLSLTVFLNL 259
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 515 LQIRNVLKFEGDTRELDRTLSGYE 586
+ I N + GDT E+ +L GY+
Sbjct: 221 MNIANYYRILGDTVEIFNSLFGYQ 244
Score = 21.4 bits (43), Expect = 9.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 142 FHKRHQRVIHSVYATTRSILDTTNPNTFCSRV 237
FH Q V+H+V ++ + T + TF V
Sbjct: 380 FHIGSQLVLHTVKTVLKTTMSTFSDITFMRTV 411
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,533
Number of Sequences: 336
Number of extensions: 4006
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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