Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120466.Seq
         (808 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001822-1|AAN71577.1|   88|Drosophila melanogaster RH42808p pro...    26   4.1  
AY061459-1|AAL29007.1|  143|Drosophila melanogaster LD41613p pro...    29   9.9  

>BT001822-1|AAN71577.1|   88|Drosophila melanogaster RH42808p
           protein.
          Length = 88

 Score = 26.2 bits (55), Expect(2) = 4.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 16  HTHTHTHTQLCINK 57
           HTHTHTHT +   K
Sbjct: 73  HTHTHTHTHVYTGK 86



 Score = 22.6 bits (46), Expect(2) = 4.1
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 10 SKHTHTHTHT 39
          + +THTHTHT
Sbjct: 69 NSNTHTHTHT 78


>AY061459-1|AAL29007.1|  143|Drosophila melanogaster LD41613p
           protein.
          Length = 143

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 1   VDISKHTHTHTHTQLC 48
           +  + HTHTHTHT  C
Sbjct: 114 IHTTAHTHTHTHTHTC 129


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,134,758
Number of Sequences: 53049
Number of extensions: 407406
Number of successful extensions: 806
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)