Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120464.Seq
         (828 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   3.9  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   5.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.0  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 531 NGEILTNKLHKIK 493
           NG+I+ N LHK K
Sbjct: 141 NGQIMLNSLHKYK 153


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +2

Query: 476 FRNLMILILCNLLVNISPFLRYA 544
           F +  + +LC++LVNI+ F++ A
Sbjct: 394 FVDYFVFLLCSILVNIA-FIKLA 415


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 268 LTHSQYSLQYSIQYFNSNKLHLFIICICM*NY 363
           L   +  + Y  Q   S K+HLF+ C+ +  Y
Sbjct: 760 LQSDRLMIDYKTQKTGS-KIHLFVKCVFLMGY 790


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,235
Number of Sequences: 336
Number of extensions: 4179
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)