Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120461.Seq
(744 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56| Best HMM Match : Actin (HMM E-Value=0) 217 6e-57
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 217 6e-57
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 217 8e-57
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 214 7e-56
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 5e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 4e-30
SB_54| Best HMM Match : Actin (HMM E-Value=0) 120 9e-28
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 1e-24
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 85 6e-17
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 84 1e-16
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 70 2e-12
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 52 5e-07
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 50 3e-06
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 3e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_55183| Best HMM Match : SGS (HMM E-Value=1.6) 34 0.14
SB_11574| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_6304| Best HMM Match : RVT_1 (HMM E-Value=3.2e-18) 34 0.14
SB_32564| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.75
SB_54038| Best HMM Match : CHCH (HMM E-Value=0.44) 31 0.75
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.75
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_18215| Best HMM Match : DUF1168 (HMM E-Value=3.7) 30 1.7
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_59484| Best HMM Match : CHCH (HMM E-Value=0.18) 30 1.7
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 30 1.7
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 1.7
SB_3573| Best HMM Match : DUF1168 (HMM E-Value=1) 30 1.7
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 30 2.3
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 30 2.3
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 30 2.3
SB_43189| Best HMM Match : PGAMP (HMM E-Value=2.1) 30 2.3
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 30 2.3
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 30 2.3
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.3
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_50825| Best HMM Match : DUF1168 (HMM E-Value=4.1) 29 3.0
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_25605| Best HMM Match : Toxin_33 (HMM E-Value=6.7) 29 3.0
SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24) 29 3.0
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 29 3.0
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_42045| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 3.0
SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 4.0
SB_48330| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_12076| Best HMM Match : CHCH (HMM E-Value=0.28) 29 4.0
SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094) 29 4.0
SB_8748| Best HMM Match : Astacin (HMM E-Value=0) 29 4.0
SB_1252| Best HMM Match : POPLD (HMM E-Value=1.9) 29 4.0
SB_46803| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 29 5.3
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 29 5.3
SB_41275| Best HMM Match : Lig_chan (HMM E-Value=2.3e-11) 29 5.3
SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41) 29 5.3
SB_35006| Best HMM Match : PT (HMM E-Value=3.4) 28 7.0
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 28 7.0
SB_39407| Best HMM Match : TIG (HMM E-Value=0) 28 7.0
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_27477| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_19784| Best HMM Match : PHD (HMM E-Value=0.0006) 28 9.2
SB_18355| Best HMM Match : Extensin_2 (HMM E-Value=0.55) 28 9.2
SB_17570| Best HMM Match : PHD (HMM E-Value=0.0006) 28 9.2
SB_14478| Best HMM Match : DUF1168 (HMM E-Value=3) 28 9.2
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 28 9.2
SB_8127| Best HMM Match : RVT_1 (HMM E-Value=0) 28 9.2
SB_2748| Best HMM Match : Exo_endo_phos (HMM E-Value=1.7e-08) 28 9.2
SB_54423| Best HMM Match : RVT_1 (HMM E-Value=7.7e-32) 28 9.2
SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086) 28 9.2
SB_21143| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.42) 28 9.2
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 217 bits (531), Expect = 6e-57
Identities = 112/159 (70%), Positives = 119/159 (74%), Gaps = 3/159 (1%)
Frame = +3
Query: 249 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGNREKMT 428
++GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK NREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 429 QIMFETFNTPAMYVAIQAVLSLYASGRPPVSCWTPATVSPTTCPSTKDTHSPTPFCVWT* 608
QIMFETFN+PAMYVAIQAVLSLYASGR T P + P +
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEG--YALPHAILRL 178
Query: 609 PVATH---RYLMKILTERGYSFTTPPSGKIVRDIKEKLC 716
+A YLMKILTERGYSFTT +IVRDIKEKLC
Sbjct: 179 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 217
Score = 128 bits (310), Expect = 4e-30
Identities = 59/61 (96%), Positives = 61/61 (100%)
Frame = +1
Query: 73 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 252
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 253 R 255
R
Sbjct: 62 R 62
Score = 85.4 bits (202), Expect = 4e-17
Identities = 48/79 (60%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = +2
Query: 509 TTGIVLDSGDGVSHNVPIYEGYALPHAILRLDLAGRD-SQIPHEDPHRARLLVHYTAERE 685
TTGIV+DSGDGV+H VPIYEGYALPHAILRLDLAGRD + + TAERE
Sbjct: 148 TTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 207
Query: 686 NRS*HQGEAVYVALDFEQE 742
+ + YVALDFEQE
Sbjct: 208 IVRDIKEKLCYVALDFEQE 226
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 217 bits (531), Expect = 6e-57
Identities = 112/159 (70%), Positives = 119/159 (74%), Gaps = 3/159 (1%)
Frame = +3
Query: 249 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGNREKMT 428
++GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK NREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 429 QIMFETFNTPAMYVAIQAVLSLYASGRPPVSCWTPATVSPTTCPSTKDTHSPTPFCVWT* 608
QIMFETFN+PAMYVAIQAVLSLYASGR T P + P +
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEG--YALPHAILRL 179
Query: 609 PVATH---RYLMKILTERGYSFTTPPSGKIVRDIKEKLC 716
+A YLMKILTERGYSFTT +IVRDIKEKLC
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
Score = 134 bits (325), Expect = 5e-32
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +1
Query: 67 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 246
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 247 SKR 255
SKR
Sbjct: 61 SKR 63
Score = 85.4 bits (202), Expect = 4e-17
Identities = 48/79 (60%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = +2
Query: 509 TTGIVLDSGDGVSHNVPIYEGYALPHAILRLDLAGRD-SQIPHEDPHRARLLVHYTAERE 685
TTGIV+DSGDGV+H VPIYEGYALPHAILRLDLAGRD + + TAERE
Sbjct: 149 TTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 208
Query: 686 NRS*HQGEAVYVALDFEQE 742
+ + YVALDFEQE
Sbjct: 209 IVRDIKEKLCYVALDFEQE 227
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 217 bits (530), Expect = 8e-57
Identities = 112/159 (70%), Positives = 119/159 (74%), Gaps = 3/159 (1%)
Frame = +3
Query: 249 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGNREKMT 428
++GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK NREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 429 QIMFETFNTPAMYVAIQAVLSLYASGRPPVSCWTPATVSPTTCPSTKDTHSPTPFCVWT* 608
QIMFETFN+PAMYVAIQAVLSLYASGR T P + P +
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEG--YALPHAIIRL 179
Query: 609 PVATH---RYLMKILTERGYSFTTPPSGKIVRDIKEKLC 716
+A YLMKILTERGYSFTT +IVRDIKEKLC
Sbjct: 180 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
Score = 130 bits (314), Expect = 1e-30
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = +1
Query: 67 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 246
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 247 SKR 255
SKR
Sbjct: 61 SKR 63
Score = 84.6 bits (200), Expect = 8e-17
Identities = 47/79 (59%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = +2
Query: 509 TTGIVLDSGDGVSHNVPIYEGYALPHAILRLDLAGRD-SQIPHEDPHRARLLVHYTAERE 685
TTGIV+DSGDGV+H VPIYEGYALPHAI+RLDLAGRD + + TAERE
Sbjct: 149 TTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAERE 208
Query: 686 NRS*HQGEAVYVALDFEQE 742
+ + YVALDFEQE
Sbjct: 209 IVRDIKEKLCYVALDFEQE 227
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 214 bits (522), Expect = 7e-56
Identities = 111/158 (70%), Positives = 118/158 (74%), Gaps = 3/158 (1%)
Frame = +3
Query: 249 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGNREKMT 428
++GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK NREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 429 QIMFETFNTPAMYVAIQAVLSLYASGRPPVSCWTPATVSPTTCPSTKDTHSPTPFCVWT* 608
QIMFETFN+PAMYVAIQAVLSLYASGR T P + P +
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEG--YALPHAILRL 178
Query: 609 PVATH---RYLMKILTERGYSFTTPPSGKIVRDIKEKL 713
+A YLMKILTERGYSFTT +IVRDIKEKL
Sbjct: 179 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 216
Score = 127 bits (307), Expect = 8e-30
Identities = 58/61 (95%), Positives = 61/61 (100%)
Frame = +1
Query: 73 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 252
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 253 R 255
R
Sbjct: 62 R 62
Score = 85.8 bits (203), Expect = 3e-17
Identities = 48/79 (60%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = +2
Query: 509 TTGIVLDSGDGVSHNVPIYEGYALPHAILRLDLAGRD-SQIPHEDPHRARLLVHYTAERE 685
TTGIV+DSGDGV+H VPIYEGYALPHAILRLDLAGRD + + TAERE
Sbjct: 148 TTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 207
Query: 686 NRS*HQGEAVYVALDFEQE 742
+ + YVALDFEQE
Sbjct: 208 IVRDIKEKLAYVALDFEQE 226
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 184 bits (449), Expect = 5e-47
Identities = 83/87 (95%), Positives = 86/87 (98%)
Frame = +3
Query: 249 QKGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGNREKMT 428
++GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK NREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 429 QIMFETFNTPAMYVAIQAVLSLYASGR 509
QIMFETFN+PAMYVAIQAVLSLYASGR
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGR 148
Score = 130 bits (314), Expect = 1e-30
Identities = 58/63 (92%), Positives = 62/63 (98%)
Frame = +1
Query: 67 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 246
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 247 SKR 255
SKR
Sbjct: 61 SKR 63
Score = 43.6 bits (98), Expect(2) = 2e-06
Identities = 20/25 (80%), Positives = 22/25 (88%), Gaps = 2/25 (8%)
Frame = +2
Query: 509 TTGIVLDSGDGVSHNVPIYE--GYA 577
TTGIV+DSGDGVSH VPIYE GY+
Sbjct: 149 TTGIVMDSGDGVSHTVPIYEERGYS 173
Score = 25.8 bits (54), Expect(2) = 2e-06
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 671 TAERENRS*HQGEAVYVALDFEQE 742
TAERE + + YVALDFEQE
Sbjct: 177 TAEREIVRDIKEKLCYVALDFEQE 200
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 128 bits (310), Expect = 4e-30
Identities = 58/61 (95%), Positives = 61/61 (100%)
Frame = +1
Query: 73 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 252
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 253 R 255
R
Sbjct: 62 R 62
Score = 90.2 bits (214), Expect = 2e-18
Identities = 56/105 (53%), Positives = 63/105 (60%), Gaps = 3/105 (2%)
Frame = +3
Query: 411 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRPPVSCWTPATVSPTTCPSTKDTHSPTP 590
N + M +IMFETFN+PAMYVAIQAVLSLYASGR T P + P
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEG--YALP 135
Query: 591 FCVWT*PVATH---RYLMKILTERGYSFTTPPSGKIVRDIKEKLC 716
+ +A YLMKILTERGYSFTT +IVRDIKEKLC
Sbjct: 136 HAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
Score = 84.6 bits (200), Expect = 8e-17
Identities = 47/79 (59%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = +2
Query: 509 TTGIVLDSGDGVSHNVPIYEGYALPHAILRLDLAGRD-SQIPHEDPHRARLLVHYTAERE 685
TTGIV+DSGDGV+H VPIYEGYALPHAI+RLDLAGRD + + TAERE
Sbjct: 111 TTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAERE 170
Query: 686 NRS*HQGEAVYVALDFEQE 742
+ + YVALDFEQE
Sbjct: 171 IVRDIKEKLCYVALDFEQE 189
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3
Query: 249 QKGILTLKYPIEHGIVTNWDDMEKIWHHTF 338
++GILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 120 bits (290), Expect = 9e-28
Identities = 67/144 (46%), Positives = 88/144 (61%), Gaps = 2/144 (1%)
Frame = +3
Query: 318 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKGNREKMTQIMFETFNTPAMYVAIQAVLSLY 497
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 498 ASGRPPVSCWTPATVSPTTCPSTKDTHSP--TPFCVWT*PVATHRYLMKILTERGYSFTT 671
ASGR + + T P P T TH YL +++TERGYSF +
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTH-YLQRLVTERGYSFQS 2247
Query: 672 PPSGKIVRDIKEKLCTSLLTSSRK 743
+I+RD+KE LC + R+
Sbjct: 2248 TAEQQIIRDLKETLCYCAMDYERE 2271
Score = 64.1 bits (149), Expect = 1e-10
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = +2
Query: 509 TTGIVLDSGDGVSHNVPIYEGYALPHAILRLDLAGRD 619
TTG V D GDGVSH VP+Y+GY LPHA R+DLAGRD
Sbjct: 2193 TTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRD 2229
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 91 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 192
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 110 bits (264), Expect = 1e-24
Identities = 61/157 (38%), Positives = 88/157 (56%), Gaps = 4/157 (2%)
Frame = +3
Query: 258 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKGNREKMTQI 434
+L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 435 MFETFNTPAMYVAIQAVLSLYASGRPPVSCWTPATVSPTTCPSTKDTHSPTPFCVWT*PV 614
MFE + +Y+AIQAVL+LYA G CP + P +
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEG--FALPHLTRRLDI 184
Query: 615 ATH---RYLMKILTERGYSFTTPPSGKIVRDIKEKLC 716
A +YL+K++ RGY+F + VR +KEKLC
Sbjct: 185 AGRDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLC 221
Score = 62.5 bits (145), Expect = 3e-10
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +2
Query: 512 TGIVLDSGDGVSHNVPIYEGYALPHAILRLDLAGRD 619
TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD
Sbjct: 153 TGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRD 188
Score = 51.2 bits (117), Expect = 9e-07
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +1
Query: 85 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKR 255
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLR 65
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 85.0 bits (201), Expect = 6e-17
Identities = 48/79 (60%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +2
Query: 509 TTGIVLDSGDGVSHNVPIYEGYALPHAILRLDLAGRD-SQIPHEDPHRARLLVHYTAERE 685
TTG+V DSGDGVSHNVPIYEGYALPHAILRLDLAGRD + + TAERE
Sbjct: 27 TTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYSFTTTAERE 86
Query: 686 NRS*HQGEAVYVALDFEQE 742
+ + YVALDF QE
Sbjct: 87 IVRDIKEKLCYVALDFYQE 105
Score = 80.6 bits (190), Expect = 1e-15
Identities = 49/98 (50%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Frame = +3
Query: 432 IMFETFNTPAMYVAIQAVLSLYASGRPPVSCWTPATVSPTTCPSTKDTHSPTPFCVWT*P 611
IMFE FN+PA+YVAIQAVLSLYASGR + P + P +
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEG--YALPHAILRLD 58
Query: 612 VATH---RYLMKILTERGYSFTTPPSGKIVRDIKEKLC 716
+A YLMK++TERGYSFTT +IVRDIKEKLC
Sbjct: 59 LAGRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLC 96
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 84.2 bits (199), Expect = 1e-16
Identities = 48/118 (40%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Frame = +3
Query: 366 EHPVLLTEAPLNPKGNREKMTQIMFETFNTPAMYVAIQAVLSLYASGRPPVSCWTPATVS 545
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GR
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 546 PTTCPSTKDTHSPTPFCVWT*PVA---THRYLMKILTERGYSFTTPPSGKIVRDIKEK 710
+ P + P + +A RYL +L + G+ F + +IVR IKE+
Sbjct: 186 SHSVPIYEG--FAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
Score = 70.9 bits (166), Expect = 1e-12
Identities = 28/37 (75%), Positives = 36/37 (97%)
Frame = +2
Query: 509 TTGIVLDSGDGVSHNVPIYEGYALPHAILRLDLAGRD 619
TTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD
Sbjct: 174 TTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRD 210
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/78 (37%), Positives = 51/78 (65%)
Frame = +3
Query: 276 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKGNREKMTQIMFETFNT 455
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 456 PAMYVAIQAVLSLYASGR 509
PA ++ +VL+ +A+GR
Sbjct: 63 PAFFLCKNSVLTAFANGR 80
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +2
Query: 509 TTGIVLDSGDGVSHNVPIYEGYALPHAILRLDLAG 613
+ G+V+DSG + VP+++GY L AI+R LAG
Sbjct: 81 SNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAG 115
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 76 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 192
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 52.0 bits (119), Expect = 5e-07
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +1
Query: 61 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 231
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 232 GDEAQSK 252
GD A +K
Sbjct: 753 GDAAVAK 759
Score = 31.9 bits (69), Expect = 0.56
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +3
Query: 648 ERGYSFTTPPSGKIVRDIKEKLC 716
+RG++FT+ +IV DIKEK+C
Sbjct: 826 QRGHNFTSSSGWQIVNDIKEKIC 848
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +2
Query: 503 RSTTGIVLDSGDGVSHNVPIYEGYALPHAILRLDLAGRD 619
R+ TG V+DSGDGV+H +P+ EGY + I + +AGRD
Sbjct: 59 RTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 270 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 383
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 33.1 bits (72), Expect = 0.24
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 503 RSTTGIVLDSGDGVSHNVPI 562
R+ TG V+DSGDGV+H +P+
Sbjct: 353 RTLTGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 189 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 73
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_55183| Best HMM Match : SGS (HMM E-Value=1.6)
Length = 242
Score = 33.9 bits (74), Expect = 0.14
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Frame = -2
Query: 512 WSTGRVQREHGLDGDVHGGRVECFEHDLGHL-LSVALGVEGSLSEQDWVFLGGDTQLIVE 336
W RV +HGL G C DL L ++ L ++ + W+ G T+ ++
Sbjct: 17 WDYERVMGKHGLGVRNDNGERLCELCDLNELVITGTLFPHRTIHKATWISPDGKTKNQID 76
Query: 335 GMMPNLLHVIPVSDDSVFDGVFEGQDTLLLCAS 237
++ N V D VF G D L+CA+
Sbjct: 77 HVLVNKRFRNSVKDTRVFRSADVGSDHYLVCAT 109
>SB_11574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 33.9 bits (74), Expect = 0.14
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Frame = -2
Query: 512 WSTGRVQREHGLDGDVHGGRVECFEHDLGHL-LSVALGVEGSLSEQDWVFLGGDTQLIVE 336
W RV +HGL G C DL L ++ L ++ + W+ G T+ ++
Sbjct: 213 WDYERVMGKHGLGVRNDNGERLCELCDLNELVITGTLFPHRTIHKATWISPDGKTKNQID 272
Query: 335 GMMPNLLHVIPVSDDSVFDGVFEGQDTLLLCAS 237
++ N V D VF G D L+CA+
Sbjct: 273 HVLVNKRFRNSVKDTRVFRSADVGSDHYLVCAT 305
>SB_6304| Best HMM Match : RVT_1 (HMM E-Value=3.2e-18)
Length = 404
Score = 33.9 bits (74), Expect = 0.14
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Frame = -2
Query: 512 WSTGRVQREHGLDGDVHGGRVECFEHDLGHL-LSVALGVEGSLSEQDWVFLGGDTQLIVE 336
W RV +HGL G C DL L ++ L ++ + W+ G T+ ++
Sbjct: 17 WDYERVMGKHGLGVRNDNGERLCELCDLNELVITGTLFPHRTIHKATWISPDGKTKNQID 76
Query: 335 GMMPNLLHVIPVSDDSVFDGVFEGQDTLLLCAS 237
++ N V D VF G D L+CA+
Sbjct: 77 HVLVNKRFRNSVKDTRVFRSADVGSDHYLVCAT 109
>SB_32564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 33.9 bits (74), Expect = 0.14
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Frame = -2
Query: 512 WSTGRVQREHGLDGDVHGGRVECFEHDLGHLLSVA-LGVEGSLSEQDWVFLGGDTQLIVE 336
W RV +HGL G C DL L+ A L ++ + W+ G T+ ++
Sbjct: 45 WDYERVMGKHGLGVRNDNGERLCELCDLDELVITATLFPHRTIHKATWISPDGKTKNQID 104
Query: 335 GMMPNLLHVIPVSDDSVFDGVFEGQDTLLLCAS 237
++ N V D VF G D L+CA+
Sbjct: 105 HVLVNKRFRNSVKDTRVFRSSDVGSDHYLVCAT 137
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.75
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 164 GNTARGASSPAKPALHIPEPLSTT 93
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_54038| Best HMM Match : CHCH (HMM E-Value=0.44)
Length = 75
Score = 31.5 bits (68), Expect = 0.75
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +1
Query: 334 PSTMS-CVSPPRNTQSCSLRLPSTPRATERR*PRSCSKHSTRPP----CTSPSKPCSRCT 498
P+ MS C PP C+ + R T++ P S+ + +P CT P SRCT
Sbjct: 8 PNEMSRCTQPPHEMSRCTQQPHEMSRCTQQ--PHEMSRCTQQPHEMSRCTQPQHEMSRCT 65
Query: 499 R 501
+
Sbjct: 66 Q 66
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.75
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 164 GNTARGASSPAKPALHIPEPLSTT 93
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.1 bits (67), Expect = 0.99
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 267 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKGNRE 419
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 164 GNTARGASSPAKPALHIPEPLSTT 93
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_18215| Best HMM Match : DUF1168 (HMM E-Value=3.7)
Length = 338
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +2
Query: 368 TPSPAH*GSPQPQGQQREDDPDHVRNI--QHARHVRRHPSRALAVRVRSTTGIVLDSGDG 541
TP P QG+ + D D V + R VRR + R ST +VLDSG+
Sbjct: 182 TPETVEMAIPIEQGELKPGDEDEVEEFVDEEGRKVRR-----IVRRTTSTKTVVLDSGET 236
Query: 542 VSHNV 556
+ NV
Sbjct: 237 LPINV 241
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 392 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 484
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_59484| Best HMM Match : CHCH (HMM E-Value=0.18)
Length = 125
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Frame = +1
Query: 349 CVSPPRNTQSCSLRLPSTPRATERR*PRSCSKHSTRPP-----CTSPSKPCSRCTR 501
C PP C+ + R T++ P S+ T+PP CT P SRCT+
Sbjct: 34 CTQPPHEMSRCTQQPNKMSRCTQQ--PNEMSR-CTQPPHEMSRCTQPPHEMSRCTQ 86
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +2
Query: 368 TPSPAH*GSPQPQGQQREDDPDHVRNI--QHARHVRRHPSRALAVRVRSTTGIVLDSGDG 541
TP P QG+ + D D V + R VRR + R ST +VLDSG+
Sbjct: 2153 TPETVEMAIPIEQGELKPGDEDEVEEFVDEEGRKVRR-----IVRRTTSTKTVVLDSGET 2207
Query: 542 VSHNV 556
+ NV
Sbjct: 2208 LPINV 2212
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 395 PQPQGQQREDDPDHVRNI--QHARHVRRHPSRALAVRVRSTTGIVLDSGDGVSHNV 556
P QG+ + D D V + R VRR + R ST +VLDSG+ + NV
Sbjct: 1893 PMEQGELKPGDEDEVEEFVDEEGRKVRR-----IVRRTTSTKTVVLDSGETLPINV 1943
Score = 27.9 bits (59), Expect = 9.2
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +2
Query: 368 TPSPAH*GSPQPQGQQREDDPDHVRNI--QHARHVRRHPSRALAVRVRSTTGIVLDSGDG 541
TP QG+ + D D V + R VRR + R ST +VLDSG+
Sbjct: 2422 TPETVEMDISMEQGELKPGDEDEVEEFVDEEGRKVRR-----IVRRTTSTKTVVLDSGET 2476
Query: 542 VSHNV 556
+ NV
Sbjct: 2477 LPINV 2481
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 246 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 112
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 216 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_3573| Best HMM Match : DUF1168 (HMM E-Value=1)
Length = 782
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +2
Query: 368 TPSPAH*GSPQPQGQQREDDPDHVRNI--QHARHVRRHPSRALAVRVRSTTGIVLDSGDG 541
TP P QG+ + D D V + R VRR + R ST +VLDSG+
Sbjct: 415 TPETVEMAIPIEQGELKPGDEDEVEEFVDEEGRKVRR-----IVRRTTSTKTVVLDSGET 469
Query: 542 VSHNV 556
+ NV
Sbjct: 470 LPINV 474
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 246 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 112
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 411 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = -1
Query: 252 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 88
FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 87 GNFFVAHLELVK 52
G V L+ K
Sbjct: 521 GQVDVLLLDFQK 532
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 246 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 112
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 274 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 246 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 112
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 252 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_43189| Best HMM Match : PGAMP (HMM E-Value=2.1)
Length = 461
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 4/88 (4%)
Frame = +2
Query: 380 AH*GSPQPQGQQREDDPDHVRNIQHARHVRRHP---SRALAVRVRSTTGIVLDSGDGVSH 550
+H G+ P P H + H RHP +++ V R T + S +H
Sbjct: 161 SHTGTKSPMLSTHGTTPSHGYQVNHGLRTVRHPHTGTKSTMVYARYDTLTRVPSHPCATH 220
Query: 551 NVPIYEGYALPHAI-LRLDLAGRDSQIP 631
GY + HA+ R D R S P
Sbjct: 221 GTTPSHGYQVTHALYARYDTLTRVSSQP 248
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 246 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 112
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 246 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 112
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +1
Query: 382 SLRLPSTPRATERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVDHRYRAG 528
SL S P+ E +C H+ R P T+PS PC Y AG
Sbjct: 342 SLYKQSDPQKHEDLAVWACYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 276 PIEHGIVTNWDDMEKIWHHTFYNE 347
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 79 EVAALVVDNGSGMCKAGFAGDDAPRAV 159
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 246 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 112
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 128 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_50825| Best HMM Match : DUF1168 (HMM E-Value=4.1)
Length = 543
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 395 PQPQGQQREDDPDHVRNI--QHARHVRRHPSRALAVRVRSTTGIVLDSGDGVSHNV 556
P QG+ + D D V + R VRR + R ST +VLDSG+ + NV
Sbjct: 486 PMEQGELKPGDEDEVEEFVDEEGRKVRR-----IVRRTTSTKTVVLDSGETLPINV 536
Score = 27.9 bits (59), Expect = 9.2
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +2
Query: 368 TPSPAH*GSPQPQGQQREDDPDHVRNI--QHARHVRRHPSRALAVRVRSTTGIVLDSGDG 541
TP QG+ + D D V + R VRR + R ST +VLDSG+
Sbjct: 209 TPETVEMDISMEQGELKPGDEDEVEEFVDEEGRKVRR-----IVRRTTSTKTVVLDSGET 263
Query: 542 VSHNV 556
+ NV
Sbjct: 264 LPINV 268
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = +1
Query: 334 PSTMSCVSPPRNTQS----CSLRLPSTPRAT-ERR*PRSCSKHSTRPPCTSPSKPCSRCT 498
PST S S PR + C+ PSTP P + HST ++PS P + CT
Sbjct: 21 PSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTHSTPSAPSTPSTPSTPCT 80
>SB_25605| Best HMM Match : Toxin_33 (HMM E-Value=6.7)
Length = 106
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 355 SPPRNTQSCSLRLPSTPRATERR*PRSCSKHSTRPPCTSPSKPCSR 492
SPPR+ S++ P+ PR TE R PR+ + + +P +PS SR
Sbjct: 27 SPPRH----SIQAPA-PRNTESRTPRTTNVATGKPRIPTPSSSASR 67
>SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24)
Length = 1592
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -2
Query: 401 VEGSLSEQDWVFLGGDTQLIVEGMMPNLLHVI 306
+ SL++Q+W + D Q+IVEG M N ++I
Sbjct: 1329 IRQSLTKQEWRWQMDDPQMIVEGAMQNHYNMI 1360
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +1
Query: 337 STMSCVSPPRNTQSCSLRLPSTPRATERR*PRSCSKHSTRPPCTSPSKPCSRCTRP 504
ST + PP + + + +TP T PR+ + +T P T+P T+P
Sbjct: 1760 STTKYIPPPHSPPTTTTTTTTTPETTA---PRTTTPETTTPETTTPRTTTPETTKP 1812
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 373 QSCSLRLP-STPRATERR*PRSCSKHSTRPPCTSPSKPCSRCTRP 504
+SC P AT + P CS+HS +P C PSK C + P
Sbjct: 1499 ESCKPNCPIKCCPATAIKCPVGCSEHSCKPEC--PSKCCMKVLPP 1541
>SB_42045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 430 RSCSKHSTRPPCTSPSKPCSRCTRPVDHRYRAGLRRRCLP 549
R C + + PP ++P S+C R H +RA R+RC P
Sbjct: 221 RPCLQRAPSPPI---AEPISKCRRSALHHWRA--RKRCWP 255
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -1
Query: 246 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 112
+C ++LSH + H M D +HG RS SCET L T
Sbjct: 176 ICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 29.1 bits (62), Expect = 4.0
Identities = 23/81 (28%), Positives = 35/81 (43%)
Frame = +1
Query: 355 SPPRNTQSCSLRLPSTPRATERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVDHRYRAGLR 534
S + ++CS P+TP A PRS S S P S +K + P R+G
Sbjct: 313 SDKTDAKNCS-SAPTTPLALT---PRSASSASKTPRSGSSAKTIQKSGSPAPKTSRSGSP 368
Query: 535 RRCLPQRAHLRRIRTPPRHSA 597
+ P+R + +I +SA
Sbjct: 369 AQGTPKRGSISKIVLKGSNSA 389
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/79 (25%), Positives = 36/79 (45%)
Frame = +3
Query: 351 RVAPEEHPVLLTEAPLNPKGNREKMTQIMFETFNTPAMYVAIQAVLSLYASGRPPVSCWT 530
++A + +P + E N K + +K+ Q M +T + + ++ +A P W
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMT---LLYNMPKIMRKFAFELPN---WA 919
Query: 531 PATVSPTTCPSTKDTHSPT 587
P PT P+ K T +PT
Sbjct: 920 PKIPLPTEPPTEKMTEAPT 938
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 441 ETFNTPAMYVAIQAVLSLYASGRPPVSCWTPATVSPTTCPSTKDTHSP 584
+T P VAI++ L+L ++ P + T TV+P T + + T +P
Sbjct: 55 DTTVAPETTVAIESTLALESTVAPETTVATETTVAPETTAAPESTLAP 102
>SB_48330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 506
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/55 (32%), Positives = 22/55 (40%)
Frame = +1
Query: 328 IIPSTMSCVSPPRNTQSCSLRLPSTPRATERR*PRSCSKHSTRPPCTSPSKPCSR 492
++P T V P S L +TPR T P S S P T +PC R
Sbjct: 452 VLPCTRWTVPQPAYFHSRGSPLRTTPRGTSTTVPLYASTFSPLWPGTGTGRPCLR 506
>SB_12076| Best HMM Match : CHCH (HMM E-Value=0.28)
Length = 115
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +1
Query: 334 PSTMS-CVSPPRNTQSCSLRLPSTPRATERR*PRSCSKHSTRPP----CTSPSKPCSRCT 498
P MS C PP C+ R T++ P S+ + +P CT P SRCT
Sbjct: 18 PHEMSRCTQPPHEMSRCTQPPHEMSRCTQQ--PNEMSRCTQQPHEMSRCTQPPHEMSRCT 75
Query: 499 R 501
+
Sbjct: 76 Q 76
>SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094)
Length = 1671
Score = 29.1 bits (62), Expect = 4.0
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +1
Query: 322 FGIIPSTMSCVSPPRNTQSCSLRLPSTPRATERR*PRSCSKHSTRPPCTSPSKPCSRC-- 495
F +P+ + S PR T + S+ STP + R+ P + + + T P + RC
Sbjct: 1019 FTSMPTKSTPTSMPRKTPNTSMPTKSTPTSMPRKTPNTFIPSTPQVGPTPPRRGNRRCKV 1078
Query: 496 TRPVDHRYRAGLRRRCLPQRAHLRRI 573
P D + L +PQR + I
Sbjct: 1079 ISPSDSPGQDILLPPLMPQRRAIPEI 1104
>SB_8748| Best HMM Match : Astacin (HMM E-Value=0)
Length = 757
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/63 (28%), Positives = 23/63 (36%)
Frame = +3
Query: 372 PVLLTEAPLNPKGNREKMTQIMFETFNTPAMYVAIQAVLSLYASGRPPVSCWTPATVSPT 551
P L +AP + T ET T ++ S ASG PP +PT
Sbjct: 518 PAGLNQAPTSSPSASTNPTPTTAETAGTSGAPTSVPPASSAPASGAPPSGAPASGATTPT 577
Query: 552 TCP 560
T P
Sbjct: 578 TGP 580
>SB_1252| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 566
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 430 RSCSKHSTRP-PCTSPSKPCSRCTRPVDHRYRAGLRRRCLPQRAH 561
R + + RP P S+P S RP R++A L+R +PQ H
Sbjct: 108 RPRQRPAQRPLPADRRSEPLSHSKRPPPRRWKAPLQRCRMPQTQH 152
>SB_46803| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 352 VSPPRNTQSCSLRLPSTPRATERR*PRSCSKHSTRPPCTSPS 477
V PP +S +R PST ++ + R P + R P T S
Sbjct: 1 VRPPSTVKSAQVRTPSTVKSAQVRTPSTVISTQVRTPSTVKS 42
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 28.7 bits (61), Expect = 5.3
Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Frame = -3
Query: 370 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMG--YLRVRIPFCSVPHLLHKSPSVPYRPS 197
CS + + C + ++V CS Y+ V CS + H+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 196 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 104
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/71 (29%), Positives = 29/71 (40%)
Frame = +2
Query: 350 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSTTGIVLD 529
ACR R P P P+ + ++D D +I R P R + V T G+ +
Sbjct: 205 ACRGRKDPRNKPPQPPPPEPTENDEDAD---SISRKRRGIGEP-RTVIVNKDKTEGLGIS 260
Query: 530 SGDGVSHNVPI 562
G H VPI
Sbjct: 261 ITGGKEHGVPI 271
>SB_41275| Best HMM Match : Lig_chan (HMM E-Value=2.3e-11)
Length = 1171
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = -3
Query: 487 STAWMATYMAGVLNVSNMIWVIFSLLPLGLRGASVSRTG 371
ST W+ T +AG+L V+ +++V+ + P G R + S+ G
Sbjct: 889 STVWLLT-LAGLLLVTILMFVVNYISPYGYRKSHKSKNG 926
>SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
Length = 1093
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +1
Query: 331 IPSTMSCVSPPRNT--QSCSLRLPSTPRATERR*PRSCSKHSTRPPCTSPSKPCSRCTRP 504
+ S C+SPP+NT Q C +L S + S K++ + C S + +C P
Sbjct: 807 LESPKQCISPPKNTLKQVCPSQLESPKQCI------SPPKNTLKQVCPSQLESPKQCISP 860
Query: 505 VDHRYRAGLRRRCLPQRAHLRRIRTPPRHS 594
+ + L++ C Q ++ +PP+++
Sbjct: 861 LKNT----LKQVCPSQLESPKQCISPPKNT 886
>SB_35006| Best HMM Match : PT (HMM E-Value=3.4)
Length = 325
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -2
Query: 284 FDGVFEGQDTLLLCASSPT*ESFCPIPTITP*WRGLPT 171
+DGV + + LLL +SSP S PI TP +GL T
Sbjct: 273 YDGVIDIKLNLLLLSSSPMFLSAVPIAPHTPTLQGLHT 310
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 164 GNTARGASSPAKPALHIPEPLSTT 93
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 164 GNTARGASSPAKPALHIPEPLSTT 93
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 159 VPLDRGKAPPSGRDGRYGTEGLLCRR*GTEQKGILTLKYPIEHGIVTNW--DDMEKIWHH 332
V L + +GR+ G+ +CR+ + ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 333 TFYN 344
T N
Sbjct: 497 TCPN 500
>SB_39407| Best HMM Match : TIG (HMM E-Value=0)
Length = 1710
Score = 28.3 bits (60), Expect = 7.0
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Frame = +3
Query: 453 TPAMYVAIQAVLSLYASGRPPVSCWTPATVSPTTCPSTKDTHSPTPF-CVWT*PVATHRY 629
TP + Q V++LY SG P + T+ T C T T SP C+ VA
Sbjct: 1300 TPTTILGKQNVITLYGSGFPAKTSDVTVTLGSTAC--TVMTSSPYSIDCLVDTLVAGSHV 1357
Query: 630 LMKILTERGYSFTTPPSGKIVRDI 701
+ L GY + K V +
Sbjct: 1358 ITVQLNPHGYPMFGMDASKTVTSV 1381
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 28.3 bits (60), Expect = 7.0
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Frame = +3
Query: 345 ELRVAPE--EHP--VLLTEAPLNPKGNREKMTQIMFETFNTPAMYVAIQAVLSLYASGRP 512
E +APE E P + E+ P+ MT + ET TP VA + + ++ P
Sbjct: 4372 ETTMAPESTEAPETTMAPESTEAPETTMAPMTTVASETTKTPDTPVAPETNMVAESTLAP 4431
Query: 513 PVSCWTPATVSPTTCPSTKDTHSP 584
+ TV+P T + + T SP
Sbjct: 4432 ETTMTPEITVAPKTTMAPETTVSP 4455
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = +3
Query: 333 TFYNELRVAPEEHPVLLTEAPLNPKGNREKMTQIMFETFNTPAMYVAIQAVLSLYASGRP 512
T E VAPE + E+ L + +T + ET TP VA + + + P
Sbjct: 4915 TMVPETTVAPET--TMAPESTLAAETTMAPVTTVASETTKTPDTTVAPETTMVPEGTLAP 4972
Query: 513 PVSCWTPATVSPTTCPSTKDTHSP 584
+ TV+P T + + T +P
Sbjct: 4973 ETTMAPETTVAPETTMAPETTVAP 4996
>SB_27477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1800
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 460 PCTSPSKPCSRCTRPVDHRYRAGLRRRCLPQRAHLRRIRTPP 585
P PS+ CS C R + +RA L C Q +H++ + P
Sbjct: 1003 PNPGPSEKCSVCLRTIARNHRAVLCDCCKGQ-SHIKCVNVKP 1043
>SB_19784| Best HMM Match : PHD (HMM E-Value=0.0006)
Length = 198
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 460 PCTSPSKPCSRCTRPVDHRYRAGLRRRCLPQRAHLRRIRTPP 585
P PS+ CS C R + +RA L C Q +H++ + P
Sbjct: 31 PNPGPSEKCSVCLRTIARNHRAVLCDCCKGQ-SHIKCVNVKP 71
>SB_18355| Best HMM Match : Extensin_2 (HMM E-Value=0.55)
Length = 247
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +1
Query: 403 PRATERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVDHRYRAGLRRRCLPQRAHL 564
PR+ R+ PR H+ P +SPS P ++ +P H+Y + CLPQ+ L
Sbjct: 136 PRSKLRQSPRV---HAGSHP-SSPSPP-TKPPKPSVHKYASDPELACLPQQTSL 184
>SB_17570| Best HMM Match : PHD (HMM E-Value=0.0006)
Length = 243
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 460 PCTSPSKPCSRCTRPVDHRYRAGLRRRCLPQRAHLRRIRTPP 585
P PS+ CS C R + +RA L C Q +H++ + P
Sbjct: 98 PNPGPSEKCSVCLRTIARNHRAVLCDCCKGQ-SHIKCVNVKP 138
>SB_14478| Best HMM Match : DUF1168 (HMM E-Value=3)
Length = 376
Score = 27.9 bits (59), Expect = 9.2
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +2
Query: 368 TPSPAH*GSPQPQGQQREDDPDHVRNI--QHARHVRRHPSRALAVRVRSTTGIVLDSGDG 541
TP QG+ + D D V + R VRR + R ST +VLDSG+
Sbjct: 210 TPETVEMDISMEQGELKPGDEDEVEEFVDEEGRKVRR-----IVRRTTSTKTVVLDSGET 264
Query: 542 VSHNV 556
+ NV
Sbjct: 265 LPINV 269
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = +1
Query: 337 STMSCVSPPRNTQSCSLRLPSTPRATERR*PRSCSKHSTRPPCTSPSKPCSRCTRP 504
+T + P T+ C+ + +T T + P++ H+T+P T P T+P
Sbjct: 118 TTKPRTTKPHTTKPCTTKPHTTKPPTTK--PQTTKPHTTKPRTTKPPTTKPHTTKP 171
>SB_8127| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1623
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 460 PCTSPSKPCSRCTRPVDHRYRAGLRRRCLPQRAHLRRIRTPP 585
P PS+ CS C R + +RA L C Q +H++ + P
Sbjct: 98 PNPGPSEKCSVCLRTIARNHRAVLCDCCKGQ-SHIKCVNVKP 138
>SB_2748| Best HMM Match : Exo_endo_phos (HMM E-Value=1.7e-08)
Length = 438
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 460 PCTSPSKPCSRCTRPVDHRYRAGLRRRCLPQRAHLRRIRTPP 585
P PS+ CS C R + +RA L C Q +H++ + P
Sbjct: 98 PNPGPSEKCSVCLRTIARNHRAVLCDCCKGQ-SHIKCVNVKP 138
>SB_54423| Best HMM Match : RVT_1 (HMM E-Value=7.7e-32)
Length = 775
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 460 PCTSPSKPCSRCTRPVDHRYRAGLRRRCLPQRAHLRRIRTPP 585
P PS+ CS C R + +RA L C Q +H++ + P
Sbjct: 98 PNPGPSEKCSVCLRTIARNHRAVLCDCCKGQ-SHIKCVNVKP 138
>SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 460 PCTSPSKPCSRCTRPVDHRYRAGLRRRCLPQRAHLRRIRTPP 585
P PS+ CS C R + +RA L C Q +H++ + P
Sbjct: 746 PNPGPSEKCSVCLRTIARNHRAVLCDCCKGQ-SHIKCVNVKP 786
>SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086)
Length = 724
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +1
Query: 403 PRATERR*PRSCSKHSTRPPCTSPSKPCSRCTRPVDHRYRAGLRRRCLPQRAHL 564
PR+ R+ PR H+ P +SPS P ++ +P H+Y + CLPQ+ L
Sbjct: 241 PRSKLRQSPRV---HAGSHP-SSPSPP-TKPPKPSVHKYASDPELACLPQQTSL 289
>SB_21143| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.42)
Length = 870
Score = 27.9 bits (59), Expect = 9.2
Identities = 27/115 (23%), Positives = 45/115 (39%)
Frame = +2
Query: 398 QPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSTTGIVLDSGDGVSHNVPIYEGYA 577
+P ++ DH R + V H +R + V T V + + + I +A
Sbjct: 551 EPATREERITHDHAR--REIGIVHGHTTREVRVAHEEATREVRITHEPATREDRITHDHA 608
Query: 578 LPHAILRLDLAGRDSQIPHEDPHRARLLVHYTAERENRS*HQGEAVYVALDFEQE 742
+ D R+ ++ HE+ R + H A RE R H+ V + EQE
Sbjct: 609 RREIGIVHDHTTREVRVAHEEATREVRVAHEQATREVRITHEQATREVRVAHEQE 663
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,605,197
Number of Sequences: 59808
Number of extensions: 718159
Number of successful extensions: 2848
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 2347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2806
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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