Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120456.Seq
         (763 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   2.5  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   5.9  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   5.9  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   7.8  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 614 TPECSWICAIRAPLVRTAAPCWGRSSTQSCCR 519
           T  C  + A+    +R AAP W  + T   CR
Sbjct: 788 TSRCRLLAAVADSTMRYAAPVWHGALTNRECR 819


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -3

Query: 614 TPECSWICAIRAPLVRTAAPCWGRSSTQSCCRLRIE 507
           T +   + ++   ++R AAP W    T+  CR  +E
Sbjct: 840 TSKARLLASVAESVIRYAAPIWHGEVTKRECRRLLE 875


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 596 ICAIRAPLVRTAAPCWGRSSTQSCCR 519
           + A+ A ++R  AP W  ++    CR
Sbjct: 789 LAAVAASIIRYGAPVWTEATDLQWCR 814


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 15/61 (24%), Positives = 25/61 (40%)
 Frame = -1

Query: 325 VPTLLEPSLTMSSIDSGFSAIYICSIYYRRVRCANWPPGRY*ALRLIVCSRLIPPIRCSA 146
           V T+ E    M +I    +  +IC+    R R    P       + ++C  L   +R S+
Sbjct: 62  VATIAEMDRIMGNIAGNSTEAFICTPVLSRQRATRAPTTSTWTSKSVLCEELFLFLRRSS 121

Query: 145 L 143
           L
Sbjct: 122 L 122


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 800,946
Number of Sequences: 2352
Number of extensions: 17255
Number of successful extensions: 45
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)