Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120455X.Seq
(387 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW71 Cluster: RNA-dependent RNA polymerase; n=1; Bomb... 79 4e-14
UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep: Poly... 41 0.007
UniRef50_P35928 Cluster: RNA replicase polyprotein; n=2; Erysimu... 41 0.007
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 40 0.013
UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; ... 38 0.089
UniRef50_Q91TW9 Cluster: Polyprotein; n=25; Marafivirus|Rep: Pol... 36 0.21
UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden death-a... 34 0.83
UniRef50_UPI00015B4152 Cluster: PREDICTED: hypothetical protein;... 34 1.1
UniRef50_P10358 Cluster: RNA replicase polyprotein; n=8; Tymovir... 33 1.4
UniRef50_A6PS51 Cluster: Putative uncharacterized protein precur... 33 2.5
UniRef50_A0D1A3 Cluster: Chromosome undetermined scaffold_34, wh... 33 2.5
UniRef50_Q9NRN7 Cluster: L-aminoadipate-semialdehyde dehydrogena... 33 2.5
UniRef50_P20126 Cluster: RNA replicase polyprotein; n=3; Tymovir... 32 4.4
UniRef50_Q0TZ37 Cluster: Putative uncharacterized protein; n=1; ... 31 7.7
>UniRef50_Q6AW71 Cluster: RNA-dependent RNA polymerase; n=1; Bombyx
mori Macula-like latent virus|Rep: RNA-dependent RNA
polymerase - Bombyx mori Macula-like latent virus
Length = 1747
Score = 78.6 bits (185), Expect = 4e-14
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +2
Query: 32 ANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLM 142
ANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKL+
Sbjct: 11 ANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLI 47
Score = 60.9 bits (141), Expect = 8e-09
Identities = 33/45 (73%), Positives = 35/45 (77%), Gaps = 9/45 (20%)
Frame = +2
Query: 197 FTNLVDTLANTIHRDAITAP---------*YKLQLYPYQVNSKLM 304
FTNLVDTLANTIHRDAITAP +KLQLYPYQVNSKL+
Sbjct: 3 FTNLVDTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLI 47
>UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep:
Polyprotein - Grapevine rupestris vein feathering virus
Length = 2068
Score = 41.1 bits (92), Expect = 0.007
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2
Query: 38 TIHRDAITAPLVETAISNFRHKLQLYPYQV 127
T+HRD + +PLVE A R LQLYPY +
Sbjct: 144 TVHRDTVCSPLVEAAAGPLRDSLQLYPYDI 173
>UniRef50_P35928 Cluster: RNA replicase polyprotein; n=2; Erysimum
latent virus|Rep: RNA replicase polyprotein - Erysimum
latent virus (ELV)
Length = 1748
Score = 41.1 bits (92), Expect = 0.007
Identities = 15/37 (40%), Positives = 29/37 (78%)
Frame = +2
Query: 32 ANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLM 142
++T HRD+I+APL+++++S + L+L+PY V +L+
Sbjct: 11 SSTTHRDSISAPLLDSSVSQLQSSLELFPYTVPKELV 47
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 40.3 bits (90), Expect = 0.013
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = +2
Query: 32 ANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSK 136
++T+HRD + APL+E+ R L+LYP+ +N++
Sbjct: 11 SSTVHRDTVAAPLLESIAQPLRDSLELYPWAINAE 45
>UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; Oat
blue dwarf virus|Rep: Replicase-associated polyprotein -
Oat blue dwarf virus
Length = 2066
Score = 37.5 bits (83), Expect = 0.089
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +2
Query: 32 ANTIHRDAITAPLVETAISNFRHKLQLYPYQV 127
++TIHRD I APL+ET S +R L+ +P+ V
Sbjct: 32 SSTIHRDTIAAPLMETLASPYRDSLRDFPWAV 63
>UniRef50_Q91TW9 Cluster: Polyprotein; n=25; Marafivirus|Rep:
Polyprotein - Maize rayado fino virus
Length = 2027
Score = 36.3 bits (80), Expect = 0.21
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 38 TIHRDAITAPLVETAISNFRHKLQLYPYQV 127
T HRD ITAP+VE+ + R L+ YP+ +
Sbjct: 20 TTHRDTITAPIVESLATPLRRSLERYPWSI 49
>UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden
death-associated virus|Rep: Polyprotein - Citrus sudden
death-associated virus
Length = 2189
Score = 34.3 bits (75), Expect = 0.83
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 32 ANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKL 139
A T HRD I PL+E +R L YP+ + + L
Sbjct: 99 APTTHRDTIATPLMEALAEPYRQSLSTYPWHIPTNL 134
>UniRef50_UPI00015B4152 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 246
Score = 33.9 bits (74), Expect = 1.1
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 25 LSRQHHPPRRHNGSP-SGNRHQQFPSQASTLPISGKFQAHDINNQQSQ 165
L + HH ++H GN+ QQ P Q + I + + +D+N+ Q Q
Sbjct: 22 LQQHHHQQQQHQDCDYRGNKKQQQPQQVESQMIGNQCEINDVNHMQQQ 69
>UniRef50_P10358 Cluster: RNA replicase polyprotein; n=8;
Tymovirus|Rep: RNA replicase polyprotein - Turnip yellow
mosaic virus
Length = 1844
Score = 33.5 bits (73), Expect = 1.4
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 32 ANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLM 142
A T HRD P++E+ + + R +Q YP+ + +L+
Sbjct: 11 APTTHRDPSLHPILESTVDSIRSSIQTYPWSIPKELL 47
>UniRef50_A6PS51 Cluster: Putative uncharacterized protein
precursor; n=1; Victivallis vadensis ATCC BAA-548|Rep:
Putative uncharacterized protein precursor -
Victivallis vadensis ATCC BAA-548
Length = 581
Score = 32.7 bits (71), Expect = 2.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 83 WRFPLGEPLWRLGGWC 36
W F LG P+W++ GWC
Sbjct: 30 WLFALGVPVWKMAGWC 45
>UniRef50_A0D1A3 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 468
Score = 32.7 bits (71), Expect = 2.5
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 46 PRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 174
P++ N SP QQ Q S +PIS +Q + NQQ Q P
Sbjct: 106 PQQVNSSPMLGAFQQSIPQPSQIPISQMYQTAPVLNQQQQYKP 148
>UniRef50_Q9NRN7 Cluster: L-aminoadipate-semialdehyde
dehydrogenase-phosphopantetheinyl transferase; n=24;
Euteleostomi|Rep: L-aminoadipate-semialdehyde
dehydrogenase-phosphopantetheinyl transferase - Homo
sapiens (Human)
Length = 309
Score = 32.7 bits (71), Expect = 2.5
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 34 QHHPPRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 174
+HH P G+RHQ PSQ + P +F + N+ S VP
Sbjct: 237 EHHFVAVALRKPDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVP 283
>UniRef50_P20126 Cluster: RNA replicase polyprotein; n=3;
Tymovirus|Rep: RNA replicase polyprotein - Eggplant
mosaic virus
Length = 1839
Score = 31.9 bits (69), Expect = 4.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 35 NTIHRDAITAPLVETAISNFRHKLQLYPY 121
+T HRDA T P++ + + R L LYP+
Sbjct: 12 STTHRDASTNPILNSVVEPLRDSLSLYPW 40
>UniRef50_Q0TZ37 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 853
Score = 31.1 bits (67), Expect = 7.7
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 40 HPPRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQ 165
H + H P G HQ PS + P+S +Q NQQSQ
Sbjct: 93 HDYQSHPSMPHGMHHQMPPSMPT--PVSAMYQTSPYANQQSQ 132
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 374,269,448
Number of Sequences: 1657284
Number of extensions: 6754215
Number of successful extensions: 17450
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17425
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15718494179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -