Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120455X.Seq
         (387 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    28   0.10 
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    25   0.73 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   0.97 
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    24   1.7  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    23   3.9  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   5.1  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    22   6.8  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    22   9.0  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    22   9.0  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 28.3 bits (60), Expect = 0.10
 Identities = 14/48 (29%), Positives = 19/48 (39%)
 Frame = +1

Query: 31  RQHHPPRRHNGSPSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 174
           +QHH    H   P     QQ+ S     P+  K + HD      +L P
Sbjct: 309 QQHH---HHQHQPQQQHQQQYHSHPHHTPVQFKTELHDNTQYDEELSP 353


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 25.4 bits (53), Expect = 0.73
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +1

Query: 25  LSRQHHPPRRHNGSPSGNRHQQFPSQASTLP 117
           L+ QHH    H G PSG    +  S    LP
Sbjct: 58  LASQHHALSHHAGEPSGGGGGRAGSDEDELP 88


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 0.97
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 16  LAWLSRQHHPPRRHNGSPSGNRHQQFPSQASTL 114
           LAW   Q + P+  N   + + HQQ  +Q   L
Sbjct: 406 LAWFGEQRNRPKDRNQPATLHHHQQVHNQQRIL 438


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 94  PSQASTLPISGKFQAHDINNQQSQLVPG 177
           P  AST P  G FQ+   NN  S ++PG
Sbjct: 10  PGAASTTPSPGAFQSLARNN--SYVIPG 35


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 256 LVQASTLPISGKFQAHD 306
           L+QA+ +P +GK+  HD
Sbjct: 113 LLQANVVPANGKYVYHD 129


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -1

Query: 369 KLLKAMLSAEARDKLTLL 316
           KLLK +L  EA+DK  LL
Sbjct: 614 KLLKELLCLEAKDKEFLL 631


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +2

Query: 8   FCA*HGFHANTIHRDAIT-APLVE 76
           F + HGF+A  +HR  +T +PL +
Sbjct: 892 FLSSHGFYAYQLHRMQLTGSPLCD 915


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 132 PSS*HKQPTKSACPWLLRLA 191
           PSS H+QP++SA   L++ A
Sbjct: 271 PSSQHQQPSRSASIDLMQSA 290



 Score = 21.8 bits (44), Expect = 9.0
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 294 PSS*HKQPTKSACPWLLRLA 353
           PSS H+QP++SA   L++ A
Sbjct: 271 PSSQHQQPSRSASIDLMQSA 290


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/28 (32%), Positives = 11/28 (39%)
 Frame = +1

Query: 40   HPPRRHNGSPSGNRHQQFPSQASTLPIS 123
            HP RR    P     Q  P Q   + +S
Sbjct: 1107 HPERREQVRPQRRIRQHMPQQKEVVELS 1134


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 380,245
Number of Sequences: 2352
Number of extensions: 7444
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29929410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)