Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120454.Seq
(754 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 27 0.12
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 23 2.0
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 23 2.0
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 23 2.0
EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B pro... 23 3.5
X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein. 22 4.6
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 22 4.6
AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein. 22 4.6
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 8.0
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 21 8.0
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 21 8.0
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 27.5 bits (58), Expect = 0.12
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 66 NTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNK 239
+T P + PS+P I + + T + +PG++ T D +D R +ST YN+
Sbjct: 58 STLDPGRKSPSSPR--ISSPSSTKSGSPGFLTYTKADRDVDLFRGSSTPESPEHYYNQ 113
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 150 GYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 248
G +PP + TS SNS +S + S E
Sbjct: 315 GLIPPEPISASLSTSNSNSPSSTNLIQNEASNE 347
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 11 NHKSTNKKYDR*TWQFLLQHPSAAAE 88
NH++ N+ Y R LL+H A+
Sbjct: 99 NHQNYNEPYQRTHENMLLRHHEEVAD 124
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 150 GYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 248
G +PP + TS SNS +S + S E
Sbjct: 104 GLIPPEPISASLSTSNSNSPSSTNLIQNEASNE 136
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 150 GYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 248
G +PP + TS SNS +S + S E
Sbjct: 104 GLIPPEPISASLSTSNSNSPSSTNLIQNEASNE 136
>EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B
protein.
Length = 279
Score = 22.6 bits (46), Expect = 3.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 697 TEWECCTSPIPPPCTGRPS*VVWPPRPKRLYP 602
+E+E C P CT RP + P+P + P
Sbjct: 79 SEYEKCDLPFNIDCTSRPK--LQEPQPSQHCP 108
>X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein.
Length = 251
Score = 22.2 bits (45), Expect = 4.6
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +3
Query: 60 YY--NTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNST 209
YY N PP+ YP + NA Y ++ +P T + R+ T
Sbjct: 35 YYENNQALPPITYPPSDWNCPQYNAPPYMSSVLQLPTVTEIQETQPQRTKPT 86
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 22.2 bits (45), Expect = 4.6
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +2
Query: 554 RCRRTR-KNFTTVALICWVKTLWPRRPNNSA 643
RC+ K+F T+ C + WP RP A
Sbjct: 15 RCKLLSCKDFDTLYRDCTTASSWPGRPPKRA 45
>AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein.
Length = 246
Score = 22.2 bits (45), Expect = 4.6
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +3
Query: 60 YY--NTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNST 209
YY N PP+ YP + NA Y ++ +P T + R+ T
Sbjct: 26 YYENNQALPPITYPPSDWNCPQYNAPPYMSSVLQLPTVTEIQETQPQRTKPT 77
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = -1
Query: 703 TVTEWECCTSPIPPPCTGRPS*VVWPPRP 617
T T W + IPPP P V P +P
Sbjct: 1075 TTTNWPTQGTTIPPPAVVMPE-VDKPSQP 1102
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 11 NHKSTNKKYDR*TWQFLLQHPSAAAE 88
NH++ N+ Y R LL+H A+
Sbjct: 99 NHQNYNEPYQRTHENMLLRHHEEVAD 124
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 11 NHKSTNKKYDR*TWQFLLQHPSAAAE 88
NH++ N+ Y R LL+H A+
Sbjct: 99 NHQNYNEPYQRTHENMLLRHHEEVAD 124
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,341
Number of Sequences: 336
Number of extensions: 4109
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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