Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120454.Seq
(754 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47272| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 33 0.33
SB_59142| Best HMM Match : RVT_1 (HMM E-Value=2.5e-09) 32 0.57
SB_52004| Best HMM Match : rve (HMM E-Value=1.2e-16) 32 0.57
SB_43735| Best HMM Match : PHD (HMM E-Value=5.6e-06) 32 0.57
SB_41742| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_39020| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 32 0.57
SB_34336| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 32 0.57
SB_32984| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 32 0.57
SB_26129| Best HMM Match : RVT_1 (HMM E-Value=1.2e-27) 32 0.57
SB_21933| Best HMM Match : RVT_1 (HMM E-Value=9.1e-27) 32 0.57
SB_20467| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 32 0.57
SB_3510| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 32 0.57
SB_1807| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 32 0.57
SB_54014| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 32 0.57
SB_51857| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 32 0.57
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 32 0.57
SB_45059| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 32 0.57
SB_41413| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 32 0.57
SB_27583| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_25888| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 32 0.57
SB_19509| Best HMM Match : rve (HMM E-Value=5.4e-26) 32 0.57
SB_16379| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 32 0.57
SB_11418| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 32 0.57
SB_10464| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_7494| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28) 32 0.57
SB_4571| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_3197| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_24| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_33431| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 31 0.76
SB_31885| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28) 31 0.76
SB_51678| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 31 1.0
SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2) 31 1.3
SB_57324| Best HMM Match : ig (HMM E-Value=1e-26) 30 2.3
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6) 30 2.3
SB_48630| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 29 3.1
SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3) 29 3.1
SB_16515| Best HMM Match : Extensin_2 (HMM E-Value=0.12) 29 3.1
SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06) 29 4.1
SB_38851| Best HMM Match : RVT_1 (HMM E-Value=9.8e-20) 29 4.1
SB_50931| Best HMM Match : Extensin_2 (HMM E-Value=0.14) 29 5.4
SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 29 5.4
SB_58447| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_22791| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_3901| Best HMM Match : PkinA_anch (HMM E-Value=2.4) 28 7.1
SB_28158| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_29515| Best HMM Match : TolA (HMM E-Value=0.031) 28 9.4
SB_20167| Best HMM Match : RhoGEF (HMM E-Value=0.73) 28 9.4
SB_6709| Best HMM Match : PCNA_C (HMM E-Value=9.8) 28 9.4
>SB_47272| Best HMM Match : zf-CCHC (HMM E-Value=0.0048)
Length = 737
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESCRAIRIYFRHRLC*IRCRRTRK 574
DT+ +VN V +FES++ I++ R K+ GQG ++C + LC R + RK
Sbjct: 430 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC-GYQHMANQELCPARGKDCRK 486
>SB_59142| Best HMM Match : RVT_1 (HMM E-Value=2.5e-09)
Length = 772
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 184 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 220
>SB_52004| Best HMM Match : rve (HMM E-Value=1.2e-16)
Length = 869
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 184 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 220
>SB_43735| Best HMM Match : PHD (HMM E-Value=5.6e-06)
Length = 772
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 184 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 220
>SB_41742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1061
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 184 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 220
>SB_39020| Best HMM Match : zf-CCHC (HMM E-Value=0.0048)
Length = 319
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 126 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 162
>SB_34336| Best HMM Match : zf-CCHC (HMM E-Value=0.0048)
Length = 374
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 10 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 46
>SB_32984| Best HMM Match : zf-CCHC (HMM E-Value=0.0048)
Length = 361
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 10 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 46
>SB_26129| Best HMM Match : RVT_1 (HMM E-Value=1.2e-27)
Length = 1036
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 184 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 220
>SB_21933| Best HMM Match : RVT_1 (HMM E-Value=9.1e-27)
Length = 510
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 10 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 46
>SB_20467| Best HMM Match : zf-CCHC (HMM E-Value=0.0048)
Length = 317
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 10 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 46
>SB_3510| Best HMM Match : zf-CCHC (HMM E-Value=0.0048)
Length = 272
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 130 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 166
>SB_1807| Best HMM Match : zf-CCHC (HMM E-Value=0.0048)
Length = 281
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 10 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 46
>SB_54014| Best HMM Match : zf-CCHC (HMM E-Value=0.0048)
Length = 176
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 10 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 46
>SB_51857| Best HMM Match : zf-CCHC (HMM E-Value=0.0048)
Length = 438
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 130 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 166
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 10 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 46
>SB_45059| Best HMM Match : zf-CCHC (HMM E-Value=0.0048)
Length = 519
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 184 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 220
>SB_41413| Best HMM Match : zf-CCHC (HMM E-Value=0.0048)
Length = 471
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 160 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 196
>SB_27583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 515
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 184 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 220
>SB_25888| Best HMM Match : zf-CCHC (HMM E-Value=0.0048)
Length = 606
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 184 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 220
>SB_19509| Best HMM Match : rve (HMM E-Value=5.4e-26)
Length = 1195
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 130 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 166
>SB_16379| Best HMM Match : zf-CCHC (HMM E-Value=0.0048)
Length = 499
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 77 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 113
>SB_11418| Best HMM Match : zf-CCHC (HMM E-Value=0.0048)
Length = 292
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 80 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 116
>SB_10464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 10 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 46
>SB_7494| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28)
Length = 960
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 184 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 220
>SB_4571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 635 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 671
>SB_3197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 184 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 220
>SB_24| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1246
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 184 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 220
>SB_33431| Best HMM Match : zf-CCHC (HMM E-Value=0.0048)
Length = 377
Score = 31.5 bits (68), Expect = 0.76
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ VN V +FES++ I++ R K+ GQG ++C
Sbjct: 184 DTSETGVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 220
>SB_31885| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28)
Length = 922
Score = 31.5 bits (68), Expect = 0.76
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ VN V +FES++ I++ R K+ GQG ++C
Sbjct: 184 DTSETGVNAVSKFESKKPNIKNYRR--KQRGQGKQCDNC 220
>SB_51678| Best HMM Match : zf-CCHC (HMM E-Value=0.0048)
Length = 351
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 184 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQYDNC 220
>SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 395 DTNPINVNVVKRFESEETMIRHLIRLQKELGQGNAAESC 511
DT+ +VN V +FES++ I++ R K+ GQG ++C
Sbjct: 184 DTSETDVNAVSKFESKKPNIKNYRR--KQRGQGKQYDNC 220
>SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2)
Length = 267
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +3
Query: 72 PPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEP 251
PP PS +T +T+ +Y Y P T TS +++T+ + Y +
Sbjct: 134 PPRYTPTPSYTSTTSYTSTTSYTPTTSYTP--TPSYTSTTSYTSTTSYTSTTSYTPTPSY 191
Query: 252 TSTPA 266
TSTP+
Sbjct: 192 TSTPS 196
>SB_57324| Best HMM Match : ig (HMM E-Value=1e-26)
Length = 947
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 167 DARQQNGHEPQQQHKLGSDRTVQQEQRTDVDAGESIWYNKCVDFVQKI-IRYYRCNDMSE 343
D R++NGH Q + D T + D E NKC D V + Y NDM
Sbjct: 834 DVRKENGHTIPQNKDIVKDTTGLNGVICNGDNSELRTQNKCTDEVARTEPNGYTDNDMDG 893
Query: 344 LSPL 355
LS +
Sbjct: 894 LSDI 897
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +3
Query: 81 PLRYPSNPATAIFTNAQTYNNAPGYVP---PTTRDNKMDTSRSNSTNSVAIAPYN-KSKE 248
P P+N T TN T N P P PT + T+++N + P N + +
Sbjct: 220 PTNQPTNQPTNQPTNQPT--NQPTNQPTNQPTNQPTNQPTNQTNQPTNQPNQPTNLPTDQ 277
Query: 249 PTSTPANL 272
PT+ PANL
Sbjct: 278 PTNQPANL 285
>SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6)
Length = 237
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Frame = +3
Query: 60 YYNTPPPPLRYP-----SNPATAIFTNAQTYNNAPGYVP--PTTRDNKMDTSRSNSTNSV 218
Y TP P + P S PA + Q + P Y P P + +M + S ST S
Sbjct: 57 YTATPAPAQQAPHTTAASQPAPYTPASGQPASYTPAYTPYTPASTVGRMPPTTSQSTPSP 116
Query: 219 AIAPYNKSKEPTSTPANLFGTT 284
A P+ + + TP L GT+
Sbjct: 117 A--PFFQQQPLVPTPVTLGGTS 136
>SB_48630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 63 YNTPPPPLRYPSNPATAIFTNAQ 131
YNT PPPL +P++P ++ Q
Sbjct: 58 YNTYPPPLSHPNDPTRGFYSPVQ 80
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +3
Query: 69 TPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 248
+P P PS+P+ + + + + +PGY P + S S S S + +P + S
Sbjct: 413 SPSSPAFMPSSPSMSPASPSYS-PTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYS 471
Query: 249 PTS 257
PTS
Sbjct: 472 PTS 474
>SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3)
Length = 312
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
Frame = +3
Query: 93 PSNPATAIFTNAQTYNNAPGY-------VPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEP 251
PS P ++ + + T P + +PPT + +S S T V +P ++
Sbjct: 49 PSLPTSSTHSTSPTVQTTPAFTTSPATILPPTAKTTSSTSSTSKPTEDVGTSPQPSTENE 108
Query: 252 TSTP 263
T TP
Sbjct: 109 THTP 112
>SB_16515| Best HMM Match : Extensin_2 (HMM E-Value=0.12)
Length = 917
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +3
Query: 75 PPPLRYPSN-PATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEP 251
PP R+PS P+ NA + +N P Y P D+ D S + +S ++ EP
Sbjct: 550 PPEYRFPSEEPSPYAEENAISRSNPPVYTPKEEDDDDDDDEESETEDSQTTLQDSRD-EP 608
Query: 252 TSTP 263
P
Sbjct: 609 LEQP 612
>SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06)
Length = 575
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 42 DERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRD-NKMDTSRSN 203
+ERG ++ +PS P TA FTN + V P +R+ N++ SRS+
Sbjct: 511 EERGYGHFIKTRTGDPHPSYPLTASFTNYPLLSTLDPLVAPLSRELNQLPASRSH 565
>SB_38851| Best HMM Match : RVT_1 (HMM E-Value=9.8e-20)
Length = 838
Score = 29.1 bits (62), Expect = 4.1
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 460 PDSVAKRVGTRQRGRVLPSDSNIFQASFVLNSLPAYAQKFYNGGADM-LGKDALAEAAKQ 636
PDSV R+ G + P + +FQ S+ SLPA A K N A G A + +
Sbjct: 168 PDSVPARILIEAAGELAPLLAPLFQQSYDSGSLPA-AWKDANVTAIFKKGHRADPKNYRP 226
Query: 637 LSL-AVQYMVAESVTC 681
+SL ++ Y V E V C
Sbjct: 227 VSLTSLIYKVMEHVVC 242
>SB_50931| Best HMM Match : Extensin_2 (HMM E-Value=0.14)
Length = 348
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +3
Query: 120 TNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTSTPANL 272
T++++ N+ G +P T DN + N A A + +K PA++
Sbjct: 61 TSSESSTNSTGAIPATKPDNSKPQDKETELNQTASATPSNAKPRGKKPASV 111
>SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1146
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 122 QRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTD 253
Q QQ + +D +QQ H+ QQQH QQ+QR D
Sbjct: 1078 QHDQQQQNTGQQQQHDKQQQ--HDQQQQHDQQQQHDQQQQQRHD 1119
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/73 (24%), Positives = 24/73 (32%)
Frame = +3
Query: 66 NTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSK 245
NT PP P+ P T T PP T T+ + + P +
Sbjct: 66 NTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTP 125
Query: 246 EPTSTPANLFGTT 284
T+TP TT
Sbjct: 126 PGTTTPTKPTTTT 138
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/72 (23%), Positives = 23/72 (31%)
Frame = +3
Query: 69 TPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKE 248
T PP P+ P T T PP T T+ + + P +
Sbjct: 109 TTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPP 168
Query: 249 PTSTPANLFGTT 284
T+TP TT
Sbjct: 169 ATTTPTKSTTTT 180
>SB_58447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 731
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +2
Query: 83 AEVSL*SGNGHIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDVD- 259
+E+S+ N Q+ + V AY R + G P ++ + R ++ E+R +VD
Sbjct: 640 SELSMNQANALKLQQVVKGKEQEVEQAY-IRMERGEAPSEEAEREWQRMIRDEERREVDN 698
Query: 260 --AGESIWYNKCV 292
A +++W + V
Sbjct: 699 IQAMQTLWLTRAV 711
>SB_22791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1798
Score = 28.3 bits (60), Expect = 7.1
Identities = 24/88 (27%), Positives = 30/88 (34%), Gaps = 1/88 (1%)
Frame = +3
Query: 72 PPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEP 251
PP P R S T Y P Y PP +T R +T A +EP
Sbjct: 300 PPTPTRGESKKIIEKTTTTH-YETRPAYTPPPKNTTIEETVRYGTTPHSASKNRVVEEEP 358
Query: 252 T-STPANLFGTTNVWILFKKLLDITGAM 332
ST F TT + + L G +
Sbjct: 359 KYSTTPRTFTTTTEEVRYVHTLIYVGVL 386
>SB_3901| Best HMM Match : PkinA_anch (HMM E-Value=2.4)
Length = 239
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 460 PDSVAKRVGTRQRGRVLPSDSNIFQASFVLNSLPA 564
PDSVA R+ G + P + +F+ S+ SLPA
Sbjct: 168 PDSVAARILIEAAGELAPLLAPLFRQSYDSGSLPA 202
>SB_28158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 93 PSNPATAIFTNA-QTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSK 245
P++ T F N+ + N + P + RDN +DTS ++ + + NK++
Sbjct: 132 PNDNNTLSFDNSFNPFRNKSTWTPSSGRDNSLDTSPNSVKLQIQNSTLNKTR 183
>SB_29515| Best HMM Match : TolA (HMM E-Value=0.031)
Length = 592
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +3
Query: 21 VQIKSMTDERGNFYYNTPPPPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRS 200
V+ K + E+ + +P P +R S I+T + T + Y + R +++ TS+
Sbjct: 209 VEEKIESSEKFSEKSESPEPSVRVDSETGDEIYTVSATPSETESYATTSMR-SRVSTSKG 267
Query: 201 NSTNSVA 221
+S+ SV+
Sbjct: 268 SSSPSVS 274
>SB_20167| Best HMM Match : RhoGEF (HMM E-Value=0.73)
Length = 445
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 460 PDSVAKRVGTRQRGRVLPSDSNIFQASFVLNSLPA 564
PDSV R+ G + P + +FQ S+ SLPA
Sbjct: 335 PDSVPARILIEAAGELAPLLAPLFQQSYDSGSLPA 369
>SB_6709| Best HMM Match : PCNA_C (HMM E-Value=9.8)
Length = 279
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 78 PPLRYPSNPATAIFTNAQTYNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNK 239
PP + +P + N +++ P Y PP D + T RS S +V A Y +
Sbjct: 144 PPSSHSRSPNSPGSPNPTLFSH-PSYYPPPPLDFQAGTKRSASCMAVVEADYGR 196
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,264,354
Number of Sequences: 59808
Number of extensions: 501234
Number of successful extensions: 2171
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2116
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -