Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120453.Seq
         (782 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   0.68 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.6  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   4.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   6.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   6.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   6.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   6.4  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   6.4  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
 Frame = -2

Query: 712 KTYKLLREHKYIVFGYIINKIICQL*TQLVLIVQK*F---QDEMTRVGTSRYFPMDMSLP 542
           K Y++L  H   +F  + N   C L T+LVL++Q  F     ++T++    +     S  
Sbjct: 160 KYYQIL-SHLSGIFFTVFNVAQCYLTTELVLMLQTRFVILNKQLTKITVKNFATKTQSA- 217

Query: 541 TFYVC*KLYKYQHYIALMVT 482
              V  K+    H+++ +VT
Sbjct: 218 ---VLGKICTLHHHLSKLVT 234


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = -2

Query: 112 FCCAHTNITAGVSFLLTL-FVYC 47
           FCCA    T  + FLL + + YC
Sbjct: 268 FCCAFIIFTMHLLFLLCIYYFYC 290


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 598 LEITFVLLKRAVFTVGKLFY**YSQKRYIY 687
           L +T VL   AVF +  LFY   + K++IY
Sbjct: 2   LVLTTVLTAAAVFLLFYLFYCYKTIKQHIY 31


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 598 LEITFVLLKRAVFTVGKLFY**YSQKRYIY 687
           L +T VL   AVF +  LFY   + K++IY
Sbjct: 2   LVLTTVLTAAAVFLLFYLFYCYKTIKQHIY 31


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 85  PLCLCVHSRTNKER*RFIKV 144
           P  L + SR+NKE  RF+KV
Sbjct: 208 PGVLGLLSRSNKESQRFLKV 227


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 85  PLCLCVHSRTNKER*RFIKV 144
           P  L + SR+NKE  RF+KV
Sbjct: 208 PGVLGLLSRSNKESQRFLKV 227


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 85  PLCLCVHSRTNKER*RFIKV 144
           P  L + SR+NKE  RF+KV
Sbjct: 208 PGVLGLLSRSNKESQRFLKV 227


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 85  PLCLCVHSRTNKER*RFIKV 144
           P  L + SR+NKE  RF+KV
Sbjct: 208 PGVLGLLSRSNKESQRFLKV 227


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 404 KVEYWLRIQIKLL*FLT*YVCTIIVYCD 487
           K E +L   I L+  +  + CT+I+ CD
Sbjct: 231 KFEPFLISNISLVSLIFLFNCTLIIMCD 258


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,702
Number of Sequences: 336
Number of extensions: 4150
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)