Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120451.Seq
(715 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 79 8e-16
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 73 3e-14
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 72 7e-14
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 69 5e-13
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 50 3e-07
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 46 7e-06
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 43 5e-05
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 41 2e-04
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 40 5e-04
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 39 6e-04
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 38 0.001
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 36 0.004
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 30 0.38
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 30 0.38
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 28 1.5
SPBC8D2.17 |||alpha-1,2-galactosyltransferase|Schizosaccharomyce... 27 2.0
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 27 2.7
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 27 3.5
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 27 3.5
SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr ... 27 3.5
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 26 4.7
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 26 6.1
SPAC23A1.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 26 6.1
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 25 8.1
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 25 8.1
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 78.6 bits (185), Expect = 8e-16
Identities = 32/99 (32%), Positives = 58/99 (58%)
Frame = +2
Query: 248 RKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTG 427
+ + VWD+GGQ + R +W Y G ++++VD+AD ++I +R ELH ++ +++
Sbjct: 63 KNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRD 122
Query: 428 IPVLVLGNKRDLPQALDEHGLIERMNLQRSRTARFAVIP 544
+LVL NK+DLP AL + + + L + + + V P
Sbjct: 123 CLLLVLANKQDLPGALSPAQITDVLQLDKLKDRLWNVQP 161
Score = 39.9 bits (89), Expect = 4e-04
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = +3
Query: 105 LFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGN 254
LF +EM + ++GL +GKTT + + Q S IPTVGFN+ VT N
Sbjct: 16 LFSNKEMRILMLGLDAAGKTTILYKLKLNQ-SVVTIPTVGFNVETVTYKN 64
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 73.3 bits (172), Expect = 3e-14
Identities = 29/91 (31%), Positives = 53/91 (58%)
Frame = +2
Query: 248 RKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTG 427
R ++ VWD+GGQ + R +W Y + I+++VD+ D ++I + EL +L + +L
Sbjct: 59 RNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRD 118
Query: 428 IPVLVLGNKRDLPQALDEHGLIERMNLQRSR 520
+LV NK+DLP A++ + +++ L R
Sbjct: 119 ALLLVFANKQDLPNAMNAAEITDKLGLHSLR 149
Score = 42.7 bits (96), Expect = 5e-05
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +3
Query: 99 KSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGN 254
+SLF K EM + +VGL +GKTT + + G+ IPT+GFN+ V N
Sbjct: 10 QSLFGKREMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVETVEYRN 60
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 72.1 bits (169), Expect = 7e-14
Identities = 32/100 (32%), Positives = 56/100 (56%)
Frame = +2
Query: 254 LTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTGIP 433
L +WDIGGQ R+ W+ Y AI+++VD+ D ++E RN L LL +++L
Sbjct: 60 LRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTS 119
Query: 434 VLVLGNKRDLPQALDEHGLIERMNLQRSRTARFAVIPYRA 553
+LVL NK D+ AL + + +N+ + +++ + + A
Sbjct: 120 ILVLANKSDVSGALSSEEISKILNISKYKSSHWRIFSVSA 159
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 69.3 bits (162), Expect = 5e-13
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +2
Query: 269 WDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTGIPVLVLG 448
+D+GG + R +W Y VN IVY+VD D +++ S+ EL +LL ++L +P L+LG
Sbjct: 69 FDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILG 128
Query: 449 NKRDLPQALDEHGLIERMNLQRS 517
NK D P A+ E L + L ++
Sbjct: 129 NKIDAPGAISEDELKAALGLYQT 151
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 50.0 bits (114), Expect = 3e-07
Identities = 21/72 (29%), Positives = 40/72 (55%)
Frame = +2
Query: 248 RKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTG 427
+ + +++WD GQ RFR++ Y RG + I+ + D D D + L +++ + G
Sbjct: 55 KTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQE-IDRYAVEG 113
Query: 428 IPVLVLGNKRDL 463
+ L++GNK D+
Sbjct: 114 VNRLLVGNKSDM 125
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 45.6 bits (103), Expect = 7e-06
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = +2
Query: 239 SNQRKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQ 418
+ Q+++ +++WD GQ +FRS+ Y RG V + D + D E + L +
Sbjct: 57 NQQKRIKLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAP 116
Query: 419 LTGIPVLVLGNKRDL 463
T I V++ G+K DL
Sbjct: 117 ST-ICVVLAGSKSDL 130
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 42.7 bits (96), Expect = 5e-05
Identities = 20/71 (28%), Positives = 37/71 (52%)
Frame = +2
Query: 248 RKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTG 427
+++ +++WD GQ RFR++ Y RG I+ + D D + R S +E+
Sbjct: 56 KRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRT-WFSNVEQHASEN 114
Query: 428 IPVLVLGNKRD 460
+ +++GNK D
Sbjct: 115 VYKILIGNKCD 125
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 40.7 bits (91), Expect = 2e-04
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = +2
Query: 242 NQRKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQL 421
+ +K+ ++WD GQ R+R++ Y RG + + D + L L E
Sbjct: 55 DNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHAD- 113
Query: 422 TGIPVLVLGNKRDL 463
+ I ++++GNK DL
Sbjct: 114 SNIVIMLVGNKTDL 127
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 39.5 bits (88), Expect = 5e-04
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +2
Query: 242 NQRKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADP---DKIEASRNELHSLLEK 412
+ + +T+++WD GQ RF+S+ + RG + V + D + + +++ R+E
Sbjct: 53 DDKVVTLQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASP 112
Query: 413 QQLTGIPVLVLGNKRDLPQ 469
P ++LGNK D+ +
Sbjct: 113 SNPETFPFILLGNKVDVEE 131
Score = 25.4 bits (53), Expect = 8.1
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 114 KEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG 224
K +++ ++G GKT+ +N + +FS+D T+G
Sbjct: 6 KHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIG 42
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 39.1 bits (87), Expect = 6e-04
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +2
Query: 251 KLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTGI 430
++T +WD+GGQ F +M C AI++M D + + S E + T +
Sbjct: 58 EITFSIWDLGGQREFVNMLPMVCNDAVAILFMFDLSRKSTLN-SIKEWYRQARGFNKTAV 116
Query: 431 PVLVLGNKRD 460
P+L+ G K D
Sbjct: 117 PILI-GTKYD 125
Score = 25.8 bits (54), Expect = 6.1
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +3
Query: 123 MELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVT 245
+++ ++G GKT+ + G F E+ T+G N + T
Sbjct: 11 IKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKT 51
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 38.3 bits (85), Expect = 0.001
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +2
Query: 242 NQRKLTIKVWDIGGQPRFRSMWERYCRGVN--AIVYMVDAADP-DKIEASRNELHSLLEK 412
+ + +T+++WD GQ RF+S+ + RG + IVY V+ + D +E R E
Sbjct: 53 DDKLVTLQLWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEF-LYQTS 111
Query: 413 QQLTGIPVLVLGNKRD 460
Q P +++GN+ D
Sbjct: 112 QDECAFPFIIVGNQID 127
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 36.3 bits (80), Expect = 0.004
Identities = 17/72 (23%), Positives = 37/72 (51%)
Frame = +2
Query: 248 RKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTG 427
R + +++WD GQ RFRS+ Y R + + + D + + + + + ++
Sbjct: 58 RTVRLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIED-VRAERGDD 116
Query: 428 IPVLVLGNKRDL 463
+ ++++GNK DL
Sbjct: 117 VIIVLVGNKTDL 128
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 29.9 bits (64), Expect = 0.38
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 126 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG 224
+L LVG +GKTTFV +G+F + I T+G
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLG 43
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 29.9 bits (64), Expect = 0.38
Identities = 14/72 (19%), Positives = 31/72 (43%)
Frame = +2
Query: 248 RKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTG 427
++ ++ D GQ + + ++ G++ V + E + +L
Sbjct: 52 QEFATEIIDTAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEW 111
Query: 428 IPVLVLGNKRDL 463
+P++V+GNK DL
Sbjct: 112 VPIVVVGNKSDL 123
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 126 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTV 221
+L +VG GKT + V +SG F E +PTV
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTV 47
>SPBC8D2.17 |||alpha-1,2-galactosyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 351
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 260 LLVSFGYFAHVETDCWNHVFTKLA*SNDVNKSCFARILQAH 138
LL+ FA D WN K A + +S + +L+AH
Sbjct: 214 LLIKNNNFAPFLLDAWNEPLLKSAGFDQAERSALSHLLEAH 254
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 27.1 bits (57), Expect = 2.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 126 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTV 221
+L +VG GKT+ ++V G F + +PTV
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTV 41
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 126 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTV 221
+L +VG GKT + V + G F E +PTV
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV 39
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 126 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTV 221
+L +VG GKT + V + G F E +PTV
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV 39
>SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 622
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 374 EASRNELHSLLEKQQLTGIPVLVLGNKRDLPQALDEHGLI 493
E E H L G P LGN+ + Q LDE+GL+
Sbjct: 256 ENEGTEPHDNLTFMTDLGTPYYSLGNEFERKQILDEYGLL 295
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 26.2 bits (55), Expect = 4.7
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -1
Query: 409 LQQAVKLVTRRLDLIRVGRVDHVHNSIDPSAITLPH*TESWLATNIP 269
L +AVKL + LDL+ V +V+ S++ A+ E W+ + P
Sbjct: 351 LLEAVKLDSTNLDLMMDLAVSYVNQSLNVQALVC---LEDWIVNSFP 394
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 25.8 bits (54), Expect = 6.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 592 SATGELCRCYLSPCTIW 542
+A LCRCY+ C+ W
Sbjct: 2319 TAPENLCRCYVGWCSFW 2335
>SPAC23A1.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 251
Score = 25.8 bits (54), Expect = 6.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 153 SGKTTFVNVIASGQFSEDMIPTVG 224
SGK TF+N + S SE +P +G
Sbjct: 111 SGKNTFINGLQSYLISETALPELG 134
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 126 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTV 221
++ ++G +GKT+ +NV G F + PT+
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTI 46
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 25.4 bits (53), Expect = 8.1
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 54 SFKMLALINRILDWIKSLFWKE 119
SFK+ A++ LDW+++L +K+
Sbjct: 180 SFKLKAVLRGHLDWVRTLSFKK 201
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,742,255
Number of Sequences: 5004
Number of extensions: 53040
Number of successful extensions: 209
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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