Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120451.Seq
(715 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 156 1e-38
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 84 9e-17
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 3e-16
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 83 3e-16
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 82 4e-16
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 79 5e-15
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 77 1e-14
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_214| Best HMM Match : Arf (HMM E-Value=0) 74 1e-13
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 74 1e-13
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 66 3e-11
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 58 7e-09
SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 57 2e-08
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 56 3e-08
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 47 1e-05
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 46 4e-05
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 45 5e-05
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 43 3e-04
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 41 9e-04
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 39 0.005
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 38 0.008
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 37 0.014
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.043
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 35 0.057
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 34 0.13
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 33 0.30
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 31 0.70
SB_59297| Best HMM Match : zf-DNL (HMM E-Value=0.68) 31 0.93
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 31 0.93
SB_3854| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_57168| Best HMM Match : DUF845 (HMM E-Value=4.1) 30 1.6
SB_52789| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 30 1.6
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_22927| Best HMM Match : SerH (HMM E-Value=1.1) 29 3.7
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 29 4.9
SB_717| Best HMM Match : Glyco_hydro_63 (HMM E-Value=0.00015) 29 4.9
SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 156 bits (379), Expect = 1e-38
Identities = 70/95 (73%), Positives = 82/95 (86%)
Frame = +2
Query: 224 FQHAQSNQRKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSL 403
F + ++ +TIKVWDIGGQPRFRSMWERYCRGVN IVYMVDAAD DK+EAS+NELH+L
Sbjct: 55 FNMRKVSKGNVTIKVWDIGGQPRFRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNL 114
Query: 404 LEKQQLTGIPVLVLGNKRDLPQALDEHGLIERMNL 508
LEK QL GIP+LVLGNK+DLP +LDE L+ER+NL
Sbjct: 115 LEKPQLAGIPILVLGNKKDLPNSLDEKELVERLNL 149
Score = 124 bits (300), Expect = 5e-29
Identities = 58/64 (90%), Positives = 59/64 (92%)
Frame = +3
Query: 63 MLALINRILDWIKSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKV 242
MLA ILDW KSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKV
Sbjct: 1 MLAFFRSILDWFKSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKV 60
Query: 243 TKGN 254
+KGN
Sbjct: 61 SKGN 64
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/20 (90%), Positives = 20/20 (100%)
Frame = +1
Query: 511 AIQDREICCYSISCKEKDNI 570
++QDREICCYSISCKEKDNI
Sbjct: 151 SVQDREICCYSISCKEKDNI 170
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 84.2 bits (199), Expect = 9e-17
Identities = 34/91 (37%), Positives = 60/91 (65%)
Frame = +2
Query: 248 RKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTG 427
+ ++ VWDIGGQ + R++W Y +G I+++VD+AD ++ E +RNELH LL +++L
Sbjct: 38 KNISFTVWDIGGQDKIRALWRVYYQGCQGIIFVVDSADRERAEEARNELHKLLAEEELQQ 97
Query: 428 IPVLVLGNKRDLPQALDEHGLIERMNLQRSR 520
+ +LV+ NK+D+ A+ + E++ L R
Sbjct: 98 VILLVIANKQDMANAMTASEIREKLKLNEIR 128
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 135 LVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGN 254
++GL +GKTT + + + +PT+GFN+ VT N
Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVST-VPTLGFNVETVTYKN 39
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 82.6 bits (195), Expect = 3e-16
Identities = 32/97 (32%), Positives = 60/97 (61%)
Frame = +2
Query: 248 RKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTG 427
+ ++ VWD+GGQ + R +W Y + ++Y+VD+ D +++ S+ EL+ +L++ +L
Sbjct: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRERVNESKEELNKMLQEDELKD 118
Query: 428 IPVLVLGNKRDLPQALDEHGLIERMNLQRSRTARFAV 538
VLV+ NK+DLP AL + E++ LQ R ++ +
Sbjct: 119 AVVLVMANKQDLPNALSVSEITEKLGLQSIRDRQWYI 155
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +3
Query: 105 LFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGN 254
LF K++M + +VGL +GKTT + + G+ IPT+GFN+ V N
Sbjct: 12 LFGKKQMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVESVEYKN 60
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 82.6 bits (195), Expect = 3e-16
Identities = 34/89 (38%), Positives = 57/89 (64%)
Frame = +2
Query: 248 RKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTG 427
+ +T VWDIGGQ + R +W Y +G I+++VD+AD ++I R EL +L+ +L G
Sbjct: 152 KNITFSVWDIGGQDKIRRLWRHYFQGAEGIIFVVDSADKERIFEVREELTRVLQHSELNG 211
Query: 428 IPVLVLGNKRDLPQALDEHGLIERMNLQR 514
+PV+V+ NK+DL A+ + E ++L +
Sbjct: 212 VPVVVVANKQDLLGAIGPDKMAEELSLYK 240
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 82.2 bits (194), Expect = 4e-16
Identities = 33/85 (38%), Positives = 54/85 (63%)
Frame = +2
Query: 254 LTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTGIP 433
+ KVWDIGG+ + R +W+ Y R +A++Y+VD+ K+E +R+EL +LL QL G P
Sbjct: 66 IRFKVWDIGGREQNRPLWKAYARQTDAVIYVVDSTSAGKLEEARDELFNLLNSAQLNGAP 125
Query: 434 VLVLGNKRDLPQALDEHGLIERMNL 508
+L+ NK+D P A+ + ++L
Sbjct: 126 ILIFANKQDCPNAIPPREITHMLSL 150
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 78.6 bits (185), Expect = 5e-15
Identities = 28/87 (32%), Positives = 56/87 (64%)
Frame = +2
Query: 248 RKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTG 427
+ +T+ +WD+GGQ + R +W Y +G ++++VD++D ++ ++ ELH +L+ +
Sbjct: 62 KNVTLTIWDVGGQDKIRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKEELHGVLDSDEFRD 121
Query: 428 IPVLVLGNKRDLPQALDEHGLIERMNL 508
+PV+V+ NK+DLP AL + + + L
Sbjct: 122 VPVVVVANKQDLPNALKAGEMAKHLGL 148
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 77.4 bits (182), Expect = 1e-14
Identities = 32/97 (32%), Positives = 60/97 (61%)
Frame = +2
Query: 248 RKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTG 427
+ + VWDIGGQ + R +W Y + ++++VD+ D D+I+ ++ EL LL++++L
Sbjct: 132 KNIKFTVWDIGGQDKIRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEEELKR 191
Query: 428 IPVLVLGNKRDLPQALDEHGLIERMNLQRSRTARFAV 538
+LVL NK+DLP ++ L E+++L R+ + +
Sbjct: 192 AALLVLANKQDLPDSMSTTELSEKLSLHTLRSRNWYI 228
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +3
Query: 78 NRILDWIKSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGN 254
N +L + L K+E+ L +VGL +GKTT + + + + IPT+GFN+ V N
Sbjct: 76 NSVLSLFRRLLGKDELRLLMVGLDAAGKTTILYHLKLDE-PVNTIPTIGFNVEVVEYKN 133
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 77.0 bits (181), Expect = 1e-14
Identities = 30/73 (41%), Positives = 48/73 (65%)
Frame = +2
Query: 254 LTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTGIP 433
L + +W+IGG ++R+ W + +VY+VD++DPD+ SR+ L SLL L G+P
Sbjct: 213 LNLNIWEIGGDEKYRAYWPNFIADTQLLVYVVDSSDPDRFNESRDNLKSLLSNSLLNGVP 272
Query: 434 VLVLGNKRDLPQA 472
VL++ +K+DLP A
Sbjct: 273 VLLVASKQDLPGA 285
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 74.1 bits (174), Expect = 1e-13
Identities = 35/90 (38%), Positives = 56/90 (62%)
Frame = +2
Query: 269 WDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTGIPVLVLG 448
+D+GG + R +W+ Y VN IV+++D AD +++ S+ EL SLL +QL+ PVL+LG
Sbjct: 25 FDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLAESKKELDSLLADEQLSSCPVLILG 84
Query: 449 NKRDLPQALDEHGLIERMNLQRSRTARFAV 538
NK D+P A+ E + + L T + +V
Sbjct: 85 NKIDIPGAVGEDYIRQNFGLFGQTTGKGSV 114
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 73.7 bits (173), Expect = 1e-13
Identities = 27/97 (27%), Positives = 58/97 (59%)
Frame = +2
Query: 248 RKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTG 427
+ ++ VWD+GGQ + R +W Y + ++++VD+ D +++ +R EL+ +L + +L
Sbjct: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELNRMLNEDELRD 118
Query: 428 IPVLVLGNKRDLPQALDEHGLIERMNLQRSRTARFAV 538
+LV NK+DLP A++ + +++ L R ++ +
Sbjct: 119 AVLLVFANKQDLPNAMNAAEITDKLGLHSLRNRQWYI 155
Score = 41.1 bits (92), Expect = 9e-04
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +3
Query: 105 LFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGN 254
LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ V N
Sbjct: 12 LFGKKEMRILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVETVEYKN 60
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 66.1 bits (154), Expect = 3e-11
Identities = 25/74 (33%), Positives = 46/74 (62%)
Frame = +2
Query: 245 QRKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLT 424
QR+ + D+GGQ + R +W Y G ++++VD AD D+I+ +R EL ++ +++
Sbjct: 134 QRRDNNALLDVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRIINDREMK 193
Query: 425 GIPVLVLGNKRDLP 466
+ +L+ NK+DLP
Sbjct: 194 DVIILIFANKQDLP 207
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/99 (28%), Positives = 54/99 (54%)
Frame = +2
Query: 212 SNSRFQHAQSNQRKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNE 391
+NS + + + VWDIGGQP R + + + ++Y+VD+ D ++ + +
Sbjct: 4 NNSTTTESMQPAKNVHFAVWDIGGQPNLRKHY--FTDDKSGLIYVVDSTDIQRLNEA--Q 59
Query: 392 LHSLLEKQQLTGIPVLVLGNKRDLPQALDEHGLIERMNL 508
L +L+++ + +PV+V+ NK+DLP L + E + L
Sbjct: 60 LLGILQEKVMVDVPVVVVANKQDLPNVLKAGDIAEHLGL 98
>SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44)
Length = 257
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/88 (29%), Positives = 48/88 (54%)
Frame = +2
Query: 275 IGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTGIPVLVLGNK 454
I GQ R W Y +A++Y+VD+ D D+I S+ EL ++LE+ +L ++V NK
Sbjct: 153 IPGQTSIRPYWRCYYANTDAVIYVVDSVDKDRIGISKQELLAMLEEDELKKAILIVFANK 212
Query: 455 RDLPQALDEHGLIERMNLQRSRTARFAV 538
+D+ A+ + + L ++ +A+
Sbjct: 213 QDMEGAMSSSEVSNALGLSALKSRTWAI 240
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 56.0 bits (129), Expect = 3e-08
Identities = 20/70 (28%), Positives = 41/70 (58%)
Frame = +2
Query: 248 RKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTG 427
+ ++ VWD+GGQ + R +W Y + ++++VD+ D ++ ++ EL +L + +L
Sbjct: 508 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEELSRMLAEDELRD 567
Query: 428 IPVLVLGNKR 457
+LV NK+
Sbjct: 568 AVLLVFANKQ 577
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 47.6 bits (108), Expect = 1e-05
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +2
Query: 260 IKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQ 415
+ +WD+GGQ RS W Y + ++++VD+AD ++ + EL LL ++
Sbjct: 4 LNIWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQGLLVEE 55
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/72 (29%), Positives = 37/72 (51%)
Frame = +2
Query: 251 KLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTGI 430
K+ +++WD GQ RFR++ Y RG + ++ + D D + LH + Q +
Sbjct: 25 KVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVNVKRWLHEI--DQNCDDV 82
Query: 431 PVLVLGNKRDLP 466
+++GNK D P
Sbjct: 83 IRILVGNKDDCP 94
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Frame = +2
Query: 254 LTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEAS---RNELHSLLEKQQLT 424
+ +++W I GQ RF SM Y +G +A V + D ++ + + +L S +
Sbjct: 68 IRLQIWLIAGQERFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRK 127
Query: 425 GIPVLVLGNKRDLPQALDEHGLIERMNLQRS 517
+P +++GNK DLP + +I+++ + S
Sbjct: 128 PVPCILVGNKSDLPDRPVDKEIIDKLCKEHS 158
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = +2
Query: 248 RKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTG 427
+ + +++WD GQ RFR++ Y RG + I+ + D D + + L +++
Sbjct: 76 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQE-IDRYACEN 134
Query: 428 IPVLVLGNKRDL 463
+ L++GNK DL
Sbjct: 135 VNKLLVGNKCDL 146
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 45.6 bits (103), Expect = 4e-05
Identities = 27/87 (31%), Positives = 48/87 (55%)
Frame = +2
Query: 209 DSNSRFQHAQSNQRKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRN 388
DS S+F + ++++T+ VWD G RFR++ + Y RG +A + M + DP ++ +
Sbjct: 47 DSCSKF--VKIGEKQVTLSVWDTAGVERFRTVTKNYYRGAHACILMFNVDDPGSLQYLLH 104
Query: 389 ELHSLLEKQQLTGIPVLVLGNKRDLPQ 469
+H ++ + VLV NK DL +
Sbjct: 105 WIHD-TDEFCPDALKVLV-ANKIDLDE 129
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 242 NQRKLTIKVWDIGGQPRFR-SMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQ 418
N + +++WD GQ RFR SM Y R VNA+V+M D EA +
Sbjct: 91 NGEFVKLQLWDTAGQERFRKSMVCHYYRNVNAVVFMYDITRKCSFEALTTWIVEYRHHAY 150
Query: 419 LTGIPVLVLGNKRDL 463
+P +++GNK DL
Sbjct: 151 SGDVPKILIGNKCDL 165
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/88 (30%), Positives = 41/88 (46%)
Frame = +2
Query: 260 IKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTGIPVL 439
+ VWDIGGQ + R W+ Y + + EL LLE+++L G+P+L
Sbjct: 64 LNVWDIGGQRKIRPYWKNYFENTDIL-----------------ELDELLEEEKLIGVPLL 106
Query: 440 VLGNKRDLPQALDEHGLIERMNLQRSRT 523
V NK+DL A + + L R+
Sbjct: 107 VFANKQDLMNAATPAEISSNLGLNTIRS 134
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +2
Query: 242 NQRKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQL 421
N + + I++WD GQ RFRS+ ++Y R + I+ D + + S+ E +
Sbjct: 941 NGQCIAIQLWDTAGQERFRSITKQYFRKADGILIFYDVTAESSFTNLKKWMVSVEEGAE- 999
Query: 422 TGIPVLVLGNKRDLPQ 469
G+ +VLGNK DL +
Sbjct: 1000 EGVAKMVLGNKTDLAE 1015
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +2
Query: 266 VWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDK---IEASRNELHSLLEKQQLTGIPV 436
+WD GQ RF+S+ + RG + V + D P+ +++ R+E + P
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPF 60
Query: 437 LVLGNKRDL 463
+VLGNK DL
Sbjct: 61 VVLGNKIDL 69
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 41.1 bits (92), Expect = 9e-04
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +2
Query: 248 RKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTG 427
+ + +++WD GQ RFRS+ Y RG + + D + + + N L
Sbjct: 142 KSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTNWLTD-ARTLASPN 200
Query: 428 IPVLVLGNKRDL 463
I ++++GNK+DL
Sbjct: 201 IVIILVGNKKDL 212
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +2
Query: 236 QSNQRKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADP---DKIEASRNELHSLL 406
+ N+ KL I WD GQ RFR++ Y RG ++ + D DK+E NE+
Sbjct: 53 EGNKAKLAI--WDTAGQERFRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYS 110
Query: 407 EKQQLTGIPVLVLGNKRD 460
K+ I +++GNK D
Sbjct: 111 TKKD---IVKMLVGNKID 125
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/71 (26%), Positives = 39/71 (54%)
Frame = +2
Query: 260 IKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTGIPVL 439
+++WD GQ RFRS+ + Y R + ++ + D R+ + + +E+ +P++
Sbjct: 493 LQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWVEA-IEESCSKPVPIM 551
Query: 440 VLGNKRDLPQA 472
+ GNK D+ Q+
Sbjct: 552 LCGNKIDIRQS 562
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +2
Query: 248 RKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTG 427
+ + +++WD GQ RFR++ Y R + IV + D + + L + E G
Sbjct: 55 KTIKLQIWDTAGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSE-YACEG 113
Query: 428 IPVLVLGNKRDL 463
+ +++GNK DL
Sbjct: 114 VNTILVGNKCDL 125
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +2
Query: 251 KLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTGI 430
K+ +++WD GQ RFRS+ + Y + ++ D + E+ L + +
Sbjct: 55 KVKLQIWDTAGQERFRSITQSYYHNADGVIVTYDITNKKSFESLPQWLDD-TNRYTSKDV 113
Query: 431 PVLVLGNKRDL 463
+ ++GNK DL
Sbjct: 114 LIAIVGNKSDL 124
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +2
Query: 257 TIKVWDIGGQPRFRSMWERYCRGVN--AIVYMVDAADP-DKIEASRNELHSLLEKQQLTG 427
T+++WD GQ RF+S+ + RG + +VY VD A + + E + +
Sbjct: 261 TLQIWDTAGQERFKSLRTPFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDN 320
Query: 428 IPVLVLGNKRDL 463
P ++LGNK D+
Sbjct: 321 FPFILLGNKVDV 332
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 38.7 bits (86), Expect = 0.005
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 242 NQRKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEA 379
N +++ +++WD GQ R+R++ Y RG + M D + + +A
Sbjct: 66 NDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFQA 111
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +2
Query: 260 IKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELH--SLLEKQQLTGIP 433
+++WD GQ RFR++ + Y R N ++ A D K + +N + ++K
Sbjct: 97 LQIWDTAGQERFRTITQSYYRSCNGVII---AYDITKCDTFKNVIRWGEDVQKYAPENAI 153
Query: 434 VLVLGNKRDL 463
L++GNK+DL
Sbjct: 154 KLLVGNKKDL 163
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +2
Query: 263 KVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTGIPVLV 442
+VWD GQ R+R++ Y RG V + D + L + E T I V++
Sbjct: 64 QVWDTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPT-IVVML 122
Query: 443 LGNKRDL 463
+GNK DL
Sbjct: 123 VGNKCDL 129
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 36.7 bits (81), Expect = 0.019
Identities = 20/74 (27%), Positives = 38/74 (51%)
Frame = +2
Query: 251 KLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTGI 430
++ ++ WD GQ +FR + + Y R +A++ + D + AS + ++K I
Sbjct: 59 RVKLQCWDTAGQEKFRGITQSYYRNADAVILVFDITNRGTF-ASIPQWLMNVQKYTNKNI 117
Query: 431 PVLVLGNKRDLPQA 472
+++GNK DL A
Sbjct: 118 LKVLVGNKTDLKGA 131
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 35.5 bits (78), Expect = 0.043
Identities = 16/70 (22%), Positives = 37/70 (52%)
Frame = +2
Query: 251 KLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTGI 430
++ +++WD GQ RFR + Y R A + + D + E+ + + + +++ +
Sbjct: 211 EVRLQIWDTAGQERFRCLIHSYIRDSEAALIVFDITNYTSFESVGDWVKMVRDERGEKAV 270
Query: 431 PVLVLGNKRD 460
++++GNK D
Sbjct: 271 -IIIVGNKMD 279
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 35.1 bits (77), Expect = 0.057
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +2
Query: 242 NQRKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQL 421
N + +WD GQ RF+S+ Y R A + + D IE++ + L + + Q
Sbjct: 5 NDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDIT----IESTFHSLRPWIRELQR 60
Query: 422 TG---IPVLVLGNKRD 460
G I + V GNK D
Sbjct: 61 YGPQDIVIAVAGNKCD 76
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Frame = +2
Query: 236 QSNQRKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMV----------DAADPDKIEASR 385
Q + ++L K++D+GGQ R W V AI+Y V + +++E S
Sbjct: 237 QFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYDLTLEEDESTNRMEESL 296
Query: 386 NELHSLLEKQQLTGIPVLVLGNKRDL 463
S++ + V++ NK+DL
Sbjct: 297 KLFESIINNKWFVDTSVILFLNKKDL 322
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Frame = +2
Query: 236 QSNQRKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMV----------DAADPDKIEASR 385
Q + ++L K++D+GGQ R W V AI+Y V + +++E S
Sbjct: 189 QFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYDLSLEEDESTNRMEESL 248
Query: 386 NELHSLLEKQQLTGIPVLVLGNKRDL 463
S++ + V++ NK+DL
Sbjct: 249 KLFESIINNKWFVDTSVILFLNKKDL 274
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 33.1 bits (72), Expect = 0.23
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Frame = +3
Query: 57 FKMLALINRILDWIKSLFWKEEMELTLVGLQYSGKTTFVNVIA-------SGQFSEDMIP 215
F+M L++ + W K LF K+E + ++GL +GKTT + I +G E +
Sbjct: 3 FEMFTLLSGL--W-KYLFQKDEYFILILGLDNAGKTTLLEQIKRKFCKTYNGIPFEKITT 59
Query: 216 TVGFNMRKVT 245
TVG N+ K+T
Sbjct: 60 TVGLNIGKIT 69
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +2
Query: 269 WDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTGIPVLVLG 448
WD+GGQ R++W++ V ++ ++ P + L + L G+P+LVL
Sbjct: 78 WDLGGQQELRTLWDKV--EVMSVKILMTRFLP---------VEEALTHKALEGVPLLVLA 126
Query: 449 NKRD 460
NK+D
Sbjct: 127 NKQD 130
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/80 (20%), Positives = 35/80 (43%)
Frame = +2
Query: 230 HAQSNQRKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLE 409
+++ + K + D GQ + +M ++Y R + + + E +
Sbjct: 269 YSKGGKNKSKTDILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDINQYREQIKR 328
Query: 410 KQQLTGIPVLVLGNKRDLPQ 469
+ +P++++GNK DLPQ
Sbjct: 329 VKDAEEVPMVLVGNKCDLPQ 348
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 31.5 bits (68), Expect = 0.70
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +2
Query: 206 HDSNSRFQHAQSNQRKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASR 385
H N + + QR + +++WD GQ RFRS+ + R + + D R
Sbjct: 151 HPLNPDGERSTRGQR-IHLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIR 209
Query: 386 NELHSL 403
N L L
Sbjct: 210 NWLSQL 215
>SB_59297| Best HMM Match : zf-DNL (HMM E-Value=0.68)
Length = 629
Score = 31.1 bits (67), Expect = 0.93
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 227 QHAQSNQRKLTIKVWDIGGQPRFRSMWERYCR-GVNAIVYMVDAADPDKIEASRNELHSL 403
+H +Q T++ D+ + F + R G+ AI + D P + A H L
Sbjct: 117 KHDLCDQVPRTVQAKDVNRRAVFAASEVGLGREGIKAICEIFDMPPPVNVTAWATHEHEL 176
Query: 404 LEKQQLTGIPVLVLGNKRDLPQA 472
L KQQ + ++ GN+++L Q+
Sbjct: 177 L-KQQRVAVQEMLEGNRKELQQS 198
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 31.1 bits (67), Expect = 0.93
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 251 KLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPD 367
++ +++WD GQ RFRS+ Y R + + D + D
Sbjct: 62 RIKLQIWDTAGQERFRSITYSYYRNTVGCLIIYDITNRD 100
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 120 EMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG 224
+ + L+G GK++ + GQF E+ PTVG
Sbjct: 13 QFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVG 47
>SB_3854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 726
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = -2
Query: 666 WLIQQNLANVIRTEL-MRATRLTVRDQPLESYVDVIFLLARYGITANLAVLDRCRFILSM 490
W ++NL + MRA L D D I L+ +YG N+ V + +L
Sbjct: 389 WNSKENLVAQPHAHIDMRAAYLGCEDSVFVGASDAIDLVRKYGFPTNVQVRSPWQRVLDR 448
Query: 489 SPCSSRACGRSRLLPST 439
SP A + LL T
Sbjct: 449 SPDREEAAYLTNLLAGT 465
>SB_57168| Best HMM Match : DUF845 (HMM E-Value=4.1)
Length = 132
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/39 (28%), Positives = 27/39 (69%)
Frame = +2
Query: 326 VNAIVYMVDAADPDKIEASRNELHSLLEKQQLTGIPVLV 442
V +V++VDA++ ++++ R+ LH + +++G P+L+
Sbjct: 36 VFGVVFVVDASNRERMDECRSILHETKQNPRVSGKPLLI 74
>SB_52789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -3
Query: 389 RYATPRSYPGRPRRP 345
RYA PR YPG P+RP
Sbjct: 270 RYAPPRPYPGTPQRP 284
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 30.3 bits (65), Expect = 1.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 248 RKLTIKVWDIGGQPRFRSMWERY 316
R L +WD+GG + R +W Y
Sbjct: 231 RSLKFTIWDVGGLQKLRPLWRHY 253
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/72 (22%), Positives = 34/72 (47%)
Frame = +2
Query: 248 RKLTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTG 427
+++ + +WD GQ + + + I+ PD +E + E + K
Sbjct: 5975 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLE-NIPEKWTPEVKHFCPN 6033
Query: 428 IPVLVLGNKRDL 463
+P++++GNK+DL
Sbjct: 6034 VPIILVGNKKDL 6045
>SB_22927| Best HMM Match : SerH (HMM E-Value=1.1)
Length = 678
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -1
Query: 226 KPTVGIMSSLNWPEAMTLTKVVLPEYCKPTSVSSISSFQNKL 101
K ++ S + +TLT LP KPT +++ S++ K+
Sbjct: 108 KSSISFSSQAQFSAKVTLTNSHLPSVIKPTEATTLKSYKTKV 149
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 156 GKTTFVNVIASGQFSEDMIPTVG 224
GKT+ V SG FSE PTVG
Sbjct: 119 GKTSLVKRFISGTFSEQYTPTVG 141
>SB_717| Best HMM Match : Glyco_hydro_63 (HMM E-Value=0.00015)
Length = 1052
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +2
Query: 341 YMVDAADPDKIEASRNELHSLLEKQQLTGIPVLVLGNKRDL 463
+++D DK+ A RN L+ +EK++ + ++ +K+DL
Sbjct: 765 WVLDGEQLDKLPAFRNRLNQFVEKRKELALQIVYPHSKQDL 805
>SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3408
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 260 IKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAAD 361
+ W +GG P S+ ER C N V D+ D
Sbjct: 249 VSEWALGGIPNMNSIEERLCLTENTTVTCADSDD 282
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,535,031
Number of Sequences: 59808
Number of extensions: 411466
Number of successful extensions: 1666
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1659
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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