Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120449.Seq
(610 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97056-3|CAB09792.1| 650|Homo sapiens DEAD (Asp-Glu-Ala-Asp) bo... 35 0.26
U59321-1|AAC50787.1| 650|Homo sapiens DEAD-box protein p72 prot... 35 0.26
CR456432-1|CAG30318.1| 652|Homo sapiens DDX17 protein. 35 0.26
BC000595-1|AAH00595.2| 729|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 35 0.26
AB209595-1|BAD92832.1| 737|Homo sapiens DEAD box polypeptide 17... 35 0.26
X52104-1|CAA36324.1| 614|Homo sapiens protein ( Human mRNA for ... 33 0.79
X15729-1|CAA33751.1| 614|Homo sapiens protein ( Human mRNA for ... 33 0.79
BT006943-1|AAP35589.1| 614|Homo sapiens DEAD/H (Asp-Glu-Ala-Asp... 33 0.79
BC016027-1|AAH16027.1| 614|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 33 0.79
AF015812-1|AAB84094.1| 614|Homo sapiens RNA helicase p68 protein. 33 0.79
BC066938-1|AAH66938.1| 648|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 30 5.5
AJ278110-1|CAB92442.1| 648|Homo sapiens DEAD-box protein protein. 30 5.5
>Z97056-3|CAB09792.1| 650|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 17 protein.
Length = 650
Score = 34.7 bits (76), Expect = 0.26
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +2
Query: 2 RQAKDLVSVLQEANQIISPQLQSMAD 79
+QA++L+ VL+EANQ I+P+L + D
Sbjct: 449 KQARELIKVLEEANQAINPKLMQLVD 474
>U59321-1|AAC50787.1| 650|Homo sapiens DEAD-box protein p72
protein.
Length = 650
Score = 34.7 bits (76), Expect = 0.26
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +2
Query: 2 RQAKDLVSVLQEANQIISPQLQSMAD 79
+QA++L+ VL+EANQ I+P+L + D
Sbjct: 449 KQARELIKVLEEANQAINPKLMQLVD 474
>CR456432-1|CAG30318.1| 652|Homo sapiens DDX17 protein.
Length = 652
Score = 34.7 bits (76), Expect = 0.26
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +2
Query: 2 RQAKDLVSVLQEANQIISPQLQSMAD 79
+QA++L+ VL+EANQ I+P+L + D
Sbjct: 449 KQARELIKVLEEANQAINPKLMQLVD 474
>BC000595-1|AAH00595.2| 729|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 17 protein.
Length = 729
Score = 34.7 bits (76), Expect = 0.26
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +2
Query: 2 RQAKDLVSVLQEANQIISPQLQSMAD 79
+QA++L+ VL+EANQ I+P+L + D
Sbjct: 528 KQARELIKVLEEANQAINPKLMQLVD 553
>AB209595-1|BAD92832.1| 737|Homo sapiens DEAD box polypeptide 17
isoform p82 variant protein.
Length = 737
Score = 34.7 bits (76), Expect = 0.26
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +2
Query: 2 RQAKDLVSVLQEANQIISPQLQSMAD 79
+QA++L+ VL+EANQ I+P+L + D
Sbjct: 530 KQARELIKVLEEANQAINPKLMQLVD 555
>X52104-1|CAA36324.1| 614|Homo sapiens protein ( Human mRNA for p68
protein. ).
Length = 614
Score = 33.1 bits (72), Expect = 0.79
Identities = 16/28 (57%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 2 RQAKDLVSVLQEANQIISPQ-LQSMADR 82
+Q DL+SVL+EANQ I+P+ LQ + DR
Sbjct: 451 KQVSDLISVLREANQAINPKLLQLVEDR 478
>X15729-1|CAA33751.1| 614|Homo sapiens protein ( Human mRNA for
nuclear p68 protein. ).
Length = 614
Score = 33.1 bits (72), Expect = 0.79
Identities = 16/28 (57%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 2 RQAKDLVSVLQEANQIISPQ-LQSMADR 82
+Q DL+SVL+EANQ I+P+ LQ + DR
Sbjct: 451 KQVSDLISVLREANQAINPKLLQLVEDR 478
>BT006943-1|AAP35589.1| 614|Homo sapiens DEAD/H
(Asp-Glu-Ala-Asp/His) box polypeptide 5 (RNA helicase,
68kDa) protein.
Length = 614
Score = 33.1 bits (72), Expect = 0.79
Identities = 16/28 (57%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 2 RQAKDLVSVLQEANQIISPQ-LQSMADR 82
+Q DL+SVL+EANQ I+P+ LQ + DR
Sbjct: 451 KQVSDLISVLREANQAINPKLLQLVEDR 478
>BC016027-1|AAH16027.1| 614|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 5 protein.
Length = 614
Score = 33.1 bits (72), Expect = 0.79
Identities = 16/28 (57%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 2 RQAKDLVSVLQEANQIISPQ-LQSMADR 82
+Q DL+SVL+EANQ I+P+ LQ + DR
Sbjct: 451 KQVSDLISVLREANQAINPKLLQLVEDR 478
>AF015812-1|AAB84094.1| 614|Homo sapiens RNA helicase p68 protein.
Length = 614
Score = 33.1 bits (72), Expect = 0.79
Identities = 16/28 (57%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 2 RQAKDLVSVLQEANQIISPQ-LQSMADR 82
+Q DL+SVL+EANQ I+P+ LQ + DR
Sbjct: 451 KQVSDLISVLREANQAINPKLLQLVEDR 478
>BC066938-1|AAH66938.1| 648|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 43 protein.
Length = 648
Score = 30.3 bits (65), Expect = 5.5
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2
Query: 2 RQAKDLVSVLQEANQIISPQLQSMADR 82
R A +L+++L+ ANQ I +L SMA+R
Sbjct: 597 RVASELINILERANQSIPEELVSMAER 623
>AJ278110-1|CAB92442.1| 648|Homo sapiens DEAD-box protein protein.
Length = 648
Score = 30.3 bits (65), Expect = 5.5
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2
Query: 2 RQAKDLVSVLQEANQIISPQLQSMADR 82
R A +L+++L+ ANQ I +L SMA+R
Sbjct: 597 RVASELINILERANQSIPEELVSMAER 623
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,890,209
Number of Sequences: 237096
Number of extensions: 1339576
Number of successful extensions: 1746
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1746
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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