Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120447.Seq
         (835 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...   153   8e-39
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         28   0.30 
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   3.8  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   3.8  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    24   6.6  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    24   6.6  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   8.7  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   8.7  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score =  153 bits (370), Expect = 8e-39
 Identities = 66/83 (79%), Positives = 77/83 (92%)
 Frame = +2

Query: 263 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 442
           +YTGQFVYCG++A L++GNV+P+G MPEGTIVCNLEEK GDRG+LAR SGN+A+VI HNP
Sbjct: 82  MYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNP 141

Query: 443 DAKRTRVKLPSGAKKVLPSSNRA 511
           D KRTRVKLPSGAKKVLPS+NRA
Sbjct: 142 DTKRTRVKLPSGAKKVLPSANRA 164



 Score =  142 bits (344), Expect = 1e-35
 Identities = 65/83 (78%), Positives = 74/83 (89%)
 Frame = +1

Query: 22  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 201
           MGRVIRAQRKGAGSVF +HTKKRKG PKLR LDYAERHGY+KGVVK II DPGRGAPLAV
Sbjct: 1   MGRVIRAQRKGAGSVFRAHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAV 60

Query: 202 VHFRDPYKFKTRKELFIAPKPLH 270
           V+FRDPY+F+  K+LFIA + ++
Sbjct: 61  VNFRDPYRFRLSKQLFIAAEGMY 83



 Score =  138 bits (335), Expect = 1e-34
 Identities = 60/64 (93%), Positives = 63/64 (98%)
 Frame = +1

Query: 505 QSMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 684
           ++MVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWP VRGVAMNPVEHPHGGGNHQHIGKA
Sbjct: 163 RAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKA 222

Query: 685 STVR 696
           STV+
Sbjct: 223 STVK 226



 Score = 27.1 bits (57), Expect = 0.70
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +3

Query: 693 QRGTSAGRKVGLIAA 737
           +RGT  GRKVGLIAA
Sbjct: 226 KRGTPPGRKVGLIAA 240


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 28.3 bits (60), Expect = 0.30
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +1

Query: 463 KATVWSQEGSAIKQQSMVGIVAGGGRIDKPILKAGRAYHK 582
           K  +W    +A   Q  +G V GG   D  IL  GRAYH+
Sbjct: 73  KQLIWD---TASAGQVPLGAVVGGHTSDGEILYVGRAYHE 109


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 130 RHGYIKGVVKDIIHDP 177
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 130 RHGYIKGVVKDIIHDP 177
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 400 CQTTSITHFLFKIAXNGTLRHSSNRHHISNFKSCFLSTINKLA 272
           C+T SIT  +        LRH      +S ++S +L  ++KLA
Sbjct: 180 CETLSITAKILAEDFQRALRHVGPAAKVSEYRSLWL-RLSKLA 221


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 761 STNPSGPASSNKTNFATSRCSSLTVEALPI 672
           S NPS   SS+ TN  TS  S+     LP+
Sbjct: 193 SGNPSTAVSSSSTNNNTSNISNRNQVNLPL 222


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 7/19 (36%), Positives = 8/19 (42%)
 Frame = +3

Query: 486 RFCHQATEHGRYCCWRWTY 542
           +FC   T    Y  W W Y
Sbjct: 513 QFCKDTTPECNYTFWEWLY 531


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -1

Query: 634 GSWQHHVHMASSYV*PCTCGMPFQLSK*VCQY 539
           GS  H     SSYV    CG P ++    C++
Sbjct: 504 GSEGHKARDCSSYVKCAACGGPHRIGHMSCEH 535


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 894,137
Number of Sequences: 2352
Number of extensions: 20709
Number of successful extensions: 50
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88065063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)