Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120447.Seq
(835 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical pr... 133 1e-31
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 36 0.036
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 32 0.58
Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical pr... 31 1.0
U70854-7|AAO91722.1| 106|Caenorhabditis elegans Galectin protei... 29 4.1
U70854-6|AAK68382.1| 232|Caenorhabditis elegans Galectin protei... 29 4.1
AB038502-1|BAB11967.1| 232|Caenorhabditis elegans galectin LEC-... 29 4.1
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical p... 28 7.2
Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z99281-24|CAE18027.1| 155|Caenorhabditis elegans Hypothetical p... 28 9.5
Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical pr... 28 9.5
U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical p... 28 9.5
L11247-6|AAA28005.2| 367|Caenorhabditis elegans Hypothetical pr... 28 9.5
AF220526-1|AAF43009.1| 332|Caenorhabditis elegans DNAse II homo... 28 9.5
>Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical
protein B0250.1 protein.
Length = 260
Score = 133 bits (322), Expect = 1e-31
Identities = 60/83 (72%), Positives = 68/83 (81%)
Frame = +1
Query: 22 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 201
MGR IR QRKGAG +F SH K RKGA KLR LDYAERHGYIKG+VKDIIHDPGRGAPLA+
Sbjct: 1 MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAI 60
Query: 202 VHFRDPYKFKTRKELFIAPKPLH 270
+ FRDPYK+KT K +A + +H
Sbjct: 61 IAFRDPYKYKTVKTTVVAAEGMH 83
Score = 133 bits (321), Expect = 2e-31
Identities = 54/83 (65%), Positives = 72/83 (86%)
Frame = +2
Query: 263 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 442
++TGQF++CG KA +++GN++PVG +PEGT +CN+E K GDRG +ARASGN+ATVI HNP
Sbjct: 82 MHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKSGDRGVIARASGNYATVIAHNP 141
Query: 443 DAKRTRVKLPSGAKKVLPSSNRA 511
D K+TR++LPSGAKKV+ S NRA
Sbjct: 142 DTKKTRIRLPSGAKKVVQSVNRA 164
Score = 125 bits (302), Expect = 3e-29
Identities = 52/66 (78%), Positives = 59/66 (89%)
Frame = +1
Query: 505 QSMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 684
++M+G+VAGGGR DKP+LKAGR+YHKYK KRN WP VRGVAMNPVEHPHGGGNHQHIG
Sbjct: 163 RAMIGLVAGGGRTDKPLLKAGRSYHKYKAKRNSWPRVRGVAMNPVEHPHGGGNHQHIGHP 222
Query: 685 STVREE 702
STVR +
Sbjct: 223 STVRRD 228
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 314 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 472
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 31.9 bits (69), Expect = 0.58
Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 8/136 (5%)
Frame = -3
Query: 767 SCSTNPSGPASSNKTNFATSRCSSLTVEALPIC*WLP-----PP*GCSTGFMATPRTYG- 606
+ T P P + T T+ ++ T ALP C + P P +T TPRTY
Sbjct: 279 AAQTTPQPPCTPRTT---TTTTTTTTTTALPPCVYTPAPPATAPPATATPATQTPRTYST 335
Query: 605 -QQLRLTL-YLWYALPAFKIGLSIRPPPATIPTMLCCLMAEPSWLQTVALLLYA*HQDCV 432
++ T+ W LP P P P+ CC + TV+ + +Q C
Sbjct: 336 TTPIKTTVPQQWTTLPP-----GPEPTPGQGPSGECCYIDLRRIQVTVSCGVSIGNQCCH 390
Query: 431 QSQWRSFQRHVPDDLY 384
QS ++QR + + Y
Sbjct: 391 QSCSGTYQRQINLNYY 406
>Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical
protein T24B8.1 protein.
Length = 134
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 428 IGHNPDAKRTRVKLPSGAKKVLPSSNRAWSVLLLE 532
IGH D +RTR LP+G KKVL + + +LL++
Sbjct: 57 IGHGSD-RRTRFVLPNGYKKVLVQNVKDLDMLLMQ 90
>U70854-7|AAO91722.1| 106|Caenorhabditis elegans Galectin protein
11, isoform b protein.
Length = 106
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 760 PRILPVLRAAIRPTLRPADVPL*QWKP-YLYVDGYHH 653
P + P+ +++P + P P+ +P +Y+DGYHH
Sbjct: 65 PMVQPIY-PSVQPIVYPTATPIIYTQPEVIYMDGYHH 100
>U70854-6|AAK68382.1| 232|Caenorhabditis elegans Galectin protein
11, isoform a protein.
Length = 232
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 760 PRILPVLRAAIRPTLRPADVPL*QWKP-YLYVDGYHH 653
P + P+ +++P + P P+ +P +Y+DGYHH
Sbjct: 191 PMVQPIY-PSVQPIVYPTATPIIYTQPEVIYMDGYHH 226
>AB038502-1|BAB11967.1| 232|Caenorhabditis elegans galectin LEC-11
protein.
Length = 232
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 760 PRILPVLRAAIRPTLRPADVPL*QWKP-YLYVDGYHH 653
P + P+ +++P + P P+ +P +Y+DGYHH
Sbjct: 191 PMVQPIY-PSVQPIVYPTATPIIYTQPEVIYMDGYHH 226
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 22 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAER 132
+GR R+ +KG F +HT K L+ LD A++
Sbjct: 464 IGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQ 500
>Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 133 HGYIKGVVKDIIHDPGRGAPLAVVHFR 213
HG + +V I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311
>Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 133 HGYIKGVVKDIIHDPGRGAPLAVVHFR 213
HG + +V I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311
>Z99281-24|CAE18027.1| 155|Caenorhabditis elegans Hypothetical
protein Y57G11C.44 protein.
Length = 155
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +1
Query: 70 VSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 195
+S ++RK + LD+++ G K ++KDI +D + P+
Sbjct: 1 MSEVRQRKSSIIDSDLDFSDSDGEFKEIIKDIENDQWKDKPV 42
>Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical
protein T05F1.8 protein.
Length = 393
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -3
Query: 593 LTLYLWYALPAFKIGLSI-RPPPATIPTML 507
LT W+ +FK+ +++ RPPP +P L
Sbjct: 309 LTALQWFIYDSFKVAMNLPRPPPPQMPESL 338
>U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical
protein C33F10.12 protein.
Length = 392
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -3
Query: 593 LTLYLWYALPAFKIGLSI-RPPPATIPTML 507
LT W+ +FK+ +++ RPPP +P L
Sbjct: 309 LTALQWFIYDSFKVAMNLPRPPPPRMPESL 338
>L11247-6|AAA28005.2| 367|Caenorhabditis elegans Hypothetical
protein F09G8.2 protein.
Length = 367
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -1
Query: 496 WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAXNGTLRHSSNRHH 320
W +L+ + TL++ N SG+ TC +TS TH + ++ G L +S++ H
Sbjct: 234 WNDLISRQN---KVTLAVESWLNGSGDDIHTTCTSTSQTHDVTEMRVTG-LNFASSKDH 288
>AF220526-1|AAF43009.1| 332|Caenorhabditis elegans DNAse II homolog
F09G8.2 protein.
Length = 332
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -1
Query: 496 WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAXNGTLRHSSNRHH 320
W +L+ + TL++ N SG+ TC +TS TH + ++ G L +S++ H
Sbjct: 209 WNDLISRQN---KVTLAVESWLNGSGDDIHTTCTSTSQTHDVTEMRVTG-LNFASSKDH 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,332,029
Number of Sequences: 27780
Number of extensions: 442562
Number of successful extensions: 1166
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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