Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120446.Seq
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    27   0.11 
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   2.3  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   4.0  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   4.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   6.9  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   6.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   6.9  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   9.2  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = +3

Query: 72  VLVETCVILSFVNSRLKPFC*FSLFTY*NILCSSSM*FLSVFFNFLT 212
           +L+ T  +L  ++S  +P+     +TY  ++ S  M F++ FFNF T
Sbjct: 29  LLLTTLTLLVILSSIDRPY--LKSYTYIKLVVSVLMDFIAYFFNFWT 73


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 112 LLTKLKITQVSTRTATHERHAQK 44
           ++TK+ +TQVST  A   R  +K
Sbjct: 122 IITKMTLTQVSTWFANARRRLKK 144


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 224 LSTRSEEVKKNREKLHRTRTQYILVGK 144
           L   SEE+K  + K++  +TQY L  K
Sbjct: 171 LEKTSEELKIPKAKINTGKTQYNLNSK 197


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 146 YLLKYIVF*FYVISLCF 196
           YLL +++   YV++LC+
Sbjct: 101 YLLLFVINVLYVLTLCY 117


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 183 FLSVFFNFLTSGR*YQKWDR 242
           F+S FF F T+G     +D+
Sbjct: 242 FISTFFYFFTTGNIIATYDK 261


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 504 SLMRFIYNGLIFAYSTKCKN 563
           +L+   ++ L + YS+KC+N
Sbjct: 155 ALLEHCFSMLNYVYSSKCEN 174


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 183 FLSVFFNFLTSGR*YQKWDR 242
           F+S FF F T+G     +D+
Sbjct: 238 FISTFFYFFTTGNIIATYDK 257


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 475 SRRYGSKYARGNHARSH 425
           +R +G K+   NH R+H
Sbjct: 141 NRSFGYKHVLQNHERTH 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,154
Number of Sequences: 336
Number of extensions: 2965
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)