Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120446.Seq
         (671 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    27   0.54 
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   8.8  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 27.1 bits (57), Expect = 0.54
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = -3

Query: 462  VQSTPAGTMPGVITSRRCLATPAYRTIATLRHGR*FAQPTPRSRTRTVTIGVDENGR 292
            V++  AG  P  I  RR    P+ RT+      R + Q   R R R  T+    +GR
Sbjct: 1107 VRAEEAGEAPPPIPMRRRGLPPSPRTVRARHERRLYLQRLYRQRAREGTLPTVPHGR 1163


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 6/44 (13%)
 Frame = +3

Query: 12  KSEPSVPFAPYFCAWRS-----CVA-VLVETCVILSFVNSRLKP 125
           ++E   PFAPY   W S     C A V + T  I  F++ R  P
Sbjct: 172 ENESITPFAPYTSIWSSPTVYICFALVAIMTLGIGGFLSCRQLP 215


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,795
Number of Sequences: 2352
Number of extensions: 11754
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)