Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120446.Seq
         (671 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z34799-3|CAA84316.3|  539|Caenorhabditis elegans Hypothetical pr...    29   2.3  
AL110479-3|CAB60312.2|  330|Caenorhabditis elegans Hypothetical ...    27   9.2  

>Z34799-3|CAA84316.3|  539|Caenorhabditis elegans Hypothetical
           protein F34D10.6 protein.
          Length = 539

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +1

Query: 235 GIEPRVLKR*RDVDLEERDATVL 303
           GIEP VL R + VD++ RD TVL
Sbjct: 307 GIEPDVLNRIQGVDVKNRDFTVL 329


>AL110479-3|CAB60312.2|  330|Caenorhabditis elegans Hypothetical
           protein Y105C5B.4 protein.
          Length = 330

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 16/52 (30%), Positives = 28/52 (53%)
 Frame = +2

Query: 434 GMVPAGVL*TISSAYCKNSLTAKITNAFYL*WAHFCIFYKMQKHANF*LANF 589
           G++P  +   ++S + K   +    N  YL  A+F +FY ++K  N  +ANF
Sbjct: 174 GIIPRFIDKQMTSTFFKIGGSFLFLNCLYLIIAYFYLFYSLKKR-NSRIANF 224


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,095,643
Number of Sequences: 27780
Number of extensions: 270198
Number of successful extensions: 534
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)