Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120445.Seq
         (784 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    29   0.032
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    24   1.2  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    24   1.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.8  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   8.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 29.5 bits (63), Expect = 0.032
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +3

Query: 114  LDMVEKNIF--LTFIDDYSKCTRIFCIKSKAETASCFIEFVNLVENKF 251
            +D +E N F  L    +Y KC ++ C K  A   S F +FV  +   F
Sbjct: 1929 VDFIETNNFDGLDLDWEYPKCWQVDCNKGPASDKSAFADFVKELHEAF 1976


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -2

Query: 561 IWFNTKKYFIRSFILYCIAIVRFF 490
           ++F     ++ SFIL CI++ RF+
Sbjct: 130 MFFRMFGLYLSSFILVCISVDRFY 153


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -2

Query: 561 IWFNTKKYFIRSFILYCIAIVRFF 490
           ++F     ++ SFIL CI++ RF+
Sbjct: 130 MFFRMFGLYLSSFILVCISVDRFY 153


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 706 ILLFNKLYNHSQCTLPTLLVGLYRPIYFSLKLL 608
           I L    YN ++ T+ + L  LY     +LKL+
Sbjct: 417 IFLITPFYNFNENTIHSKLCKLYATFLIALKLV 449


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +1

Query: 343 ITMSTLCS*IKWGSRKV*QVCYGYR*MLNERS*NSQKIL 459
           I +   CS +   S+K+  VCY Y+   ++ S   +++L
Sbjct: 272 ILLIMTCSGVHSESQKLVGVCYEYQDRFSDESKKRRELL 310


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,420
Number of Sequences: 336
Number of extensions: 3168
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)